Collaborative Ontology Development in Real Telecom Environment. - Jacek Frankowski; Pawel Rubach; Ewelina Szczekocka (BPSC, 2007)

Semantic Business Process Management: An Empirical Case Study. - Sebastian Stein 002; Christian Stamber; Marwane El Kharbili; Pawel Rubach (MobIS Workshops, 2008)

Autonomic SLA Management in Federated Computing Environments. - Pawel Rubach; Michael W. Sobolewski (ICPP Workshops, 2009)

Dynamic SLA Negotiation in Autonomic Federated Environments. - Pawel Rubach; Michael W. Sobolewski (OTM Workshops, 2009)

Extreme Value Model for Volatility Measure in Machine Learning Ensemble. - Ryszard Szupiluk; Pawel Rubach (ICAISC (1), 2018)

KnotProt 2.0: a database of proteins with knots and other entangled structures. - Pawel Dabrowski-Tumanski; Pawel Rubach; Dimos Goundaroulis; Julien Dorier; Piotr Sulkowski; Kenneth C. Millett; Eric J. Rawdon; Andrzej Stasiak; Joanna I. Sulkowska (Nucleic Acids Res., 2019)

Identification of Delays in AMUSE Algorithm for Blind Signal Separation of Financial Data. - Ryszard Szupiluk; Pawel Rubach (ICAISC (2), 2020)

Genus for biomolecules. - Pawel Rubach; Sebastian Zajac; Borys Jastrzebski; Joanna I. Sulkowska; Piotr Sulkowski (Nucleic Acids Res., 2020)

Topoly: Python package to analyze topology of polymers. - Pawel Dabrowski-Tumanski; Pawel Rubach; Wanda Niemyska; Bartosz Ambrozy Gren; Joanna I. Sulkowska (Briefings Bioinform., 2021)

AlphaKnot: server to analyze entanglement in structures predicted by AlphaFold methods. - Wanda Niemyska; Pawel Rubach; Bartosz Ambrozy Gren; Mai Lan Nguyen; Wojciech Garstka; Fernando Bruno da Silva; Eric J. Rawdon; Joanna I. Sulkowska (Nucleic Acids Res., 2022)

PDBe-KB: collaboratively defining the biological context of structural data. - Mihaly Varadi; Stephen Anyango; David R. Armstrong; John M. Berrisford; Preeti Choudhary; Mandar S. Deshpande; Nurul Nadzirin; Sreenath Nair; Lukás Pravda; Ahsan Tanweer; Bissan Al-Lazikani; Claudia Andreini; et al. (Nucleic Acids Res., 2022)

Applying Large-Scale Distributed Computing to Structural Bioinformatics - Bridging Legacy HPC Clusters With Big Data Technologies Using kafka-slurm-agent. - Pawel Rubach (CoRR, 2025)