Parallel Algorithms for Evolutionary History Reconstruction. - Jacek Blazewicz; Piotr Formanowicz; Pawel Kedziora; Pawel Wojciechowski (PPAM, 2003)

Some remarks on evaluating the quality of the multiple sequence alignment based on the BAliBASE benchmark. - Jacek Blazewicz; Piotr Formanowicz; Pawel Wojciechowski (Int. J. Appl. Math. Comput. Sci., 2009)

Protein alignment algorithms with an efficient backtracking routine on multiple GPUs. - Jacek Blazewicz; Wojciech Frohmberg; Michal Kierzynka; Erwin Pesch; Pawel Wojciechowski (BMC Bioinform., 2011)

GeVaDSs - decision support system for novel Genetic Vaccine development process. - Jacek Blazewicz; Marcin Borowski; Wahiba Chaara; Pawel Kedziora; David Klatzmann; Piotr Lukasiak; Adrien Six; Pawel Wojciechowski (BMC Bioinform., 2012)

G-MSA - A GPU-based, fast and accurate algorithm for multiple sequence alignment. - Jacek Blazewicz; Wojciech Frohmberg; Michal Kierzynka; Pawel Wojciechowski (J. Parallel Distributed Comput., 2013)

Graph algorithms for DNA sequencing - origins, current models and the future. - Jacek Blazewicz; Marta Kasprzak; Michal Kierzynka; Wojciech Frohmberg; Aleksandra Swiercz; Pawel Wojciechowski; Piotr Zurkowski (Eur. J. Oper. Res., 2018)

Genome-scale de novo assembly using ALGA. - Sylwester Swat; Artur Laskowski; Jan Badura; Wojciech Frohmberg; Pawel Wojciechowski; Aleksandra Swiercz; Marta Kasprzak; Jacek Blazewicz (Bioinform., 2021)

Assignment of tasks to machines under data replication with a tie to Steiner systems. - Pawel Wojciechowski; Marta Kasprzak (Int. J. Appl. Math. Comput. Sci., 2024)