An Authentication Protocol for Mobilde Devices. - Paulo Simões 001; Pedro Alves; José Rogado; Paulo Ferreira 001 (ICDCS Workshop on Internet, 2000)

A computational approach toward label-free protein quantification using predicted peptide detectability. - Haixu Tang; Randy J. Arnold; Pedro Alves; Zhiyin Xun; David E. Clemmer; Milos V. Novotny; James P. Reilly; Predrag Radivojac (ISMB (Supplement of Bioinformatics), 2006)

Advancement in Protein Inference from Shotgun Proteomics Using Peptide Detectability. - Pedro Alves; Randy J. Arnold; Milos V. Novotny; Predrag Radivojac; James P. Reilly; Haixu Tang (Pacific Symposium on Biocomputing, 2007)

Fast and accurate identification of semi-tryptic peptides in shotgun proteomics. - Pedro Alves; Randy J. Arnold; David E. Clemmer; Yixue Li; James P. Reilly; Quanhu Sheng; Haixu Tang; Zhiyin Xun; Rong Zeng; Predrag Radivojac (Bioinform., 2008)

Enriching PubMed Related Article Search with Sentence Level Co-citations. - Nam Tran; Pedro Alves; Shuangge Ma; Michael Krauthammer (AMIA, 2009)

A Clinical Decision Support System for Breast Cancer Patients. - Ana S. Fernandes; Pedro Alves; Ian H. Jarman; Terence A. Etchells; José Manuel Fonseca; Paulo J. G. Lisboa (DoCEIS, 2010)

ReConMUC: adaptable consistency requirements for efficient large-scale multi-user chat. - Pedro Alves; Paulo Ferreira 001 (CSCW, 2011)

Construction and Analysis of an Integrated Regulatory Network Derived from High-Throughput Sequencing Data. - Chao Cheng; Koon-Kiu Yan; Woochang Hwang; Jiang Qian; Nitin Bhardwaj; Joel S. Rozowsky; Zhi John Lu; Wei Niu; Pedro Alves; Masaomi Kato; Michael Snyder 001; Mark Gerstein (PLoS Comput. Biol., 2011)

Context-aware efficient message propagation. - Pedro Alves; Paulo Ferreira 001 (ARM, 2012)

Radiator: context propagation based on delayed aggregation. - Pedro Alves; Paulo Ferreira 001 (CSCW, 2013)

AnonyLikes: Anonymous Quantitative Feedback on Social Networks. - Pedro Alves; Paulo Ferreira 001 (Middleware, 2013)

Digital multi-wavelength generation and real time video transmission in a coherent ultra dense WDM PON. - Harald Rohde; Erich Gottwald; Pedro Alves; Carlos Oliveira; I. Dedic; Tomislav Drenski (OFC/NFOEC, 2013)

AnonyFacebook - Liking Facebook Posts Anonymously. - Pedro Alves; Paulo Ferreira 001 (OTM Workshops, 2013)

Radiator - efficient message propagation in context-aware systems. - Pedro Alves; Paulo Ferreira 001 (J. Internet Serv. Appl., 2014)

Distributed Context-Aware Systems - Paulo Ferreira 001; Pedro Alves (Springer, 2014)

A novel modular voltage balancing topology for active battery management system. - Vitor Monteiro; Pedro Alves; Andrés A. Nogueiras Meléndez; Carlos Couto; João Luiz Afonso (ISIE, 2016)

Multiple-Swarm Ensembles: Improving the Predictive Power and Robustness of Predictive Models and Its Use in Computational Biology. - Pedro Alves; Shuang Liu; Daifeng Wang; Mark Gerstein (IEEE ACM Trans. Comput. Biol. Bioinform., 2018)

How to Get a Badge? Unlock Your Mind : Motivation through Student Empowerment. - Nuno Pombo; Nuno M. Garcia; Pedro Alves (EDUCON, 2019)

Intelligent Virtual Assistant for Promoting Behaviour Change in Older People with T2D. - João Balsa; Pedro Neves; Isa Brito Félix; Mara Pereira Guerreiro; Pedro Alves; Maria Beatriz Carmo; Diogo Marques 002; António Dias; Adriana Henriques; Ana Paula Cláudio (EPIA (1), 2019)

Anthropomorphic Virtual Assistant to Support Self-care of Type 2 Diabetes in Older People: A Perspective on the Role of Artificial Intelligence. - Gergely Magyar; João Balsa; Ana Paula Cláudio; Maria Beatriz Carmo; Pedro Neves; Pedro Alves; Isa Brito Félix; Nuno Pimenta; Mara Pereira Guerreiro (VISIGRAPP (1: GRAPP), 2019)

Determination of the Walking Direction of a Pedestrian from Acceleration Data. - Ricardo Leonardo; Gonçalo Rodrigues; Marília Barandas; Pedro Alves; Ricardo Santos 006; Hugo Gamboa (IPIN, 2019)

Automatic Focus Assessment on Dermoscopic Images Acquired with Smartphones. - José Alves; Dinis Moreira; Pedro Alves; Luís Rosado; Maria João M. Vasconcelos (Sensors, 2019)

E-Skin Bimodal Sensors for Robotics and Prosthesis Using PDMS Molds Engraved by Laser. - Andreia dos Santos; Nuno Pinela; Pedro Alves; Rodrigo Santos; Ricardo Farinha; Elvira Fortunato; Rodrigo Martins; Hugo Águas; Rui Igreja (Sensors, 2019)

CDRGen: A Clinical Data Registry Generator (Formal and/or Technical Paper). - Pedro Alves; Manuel J. Fonseca; João D. Pereira; Helena Galhardas (Poly/DMAH@VLDB, 2020)

Automated Mobile Image Acquisition of Macroscopic Dermatological Lesions. - Dinis Moreira; Pedro Alves; Francisco Veiga; Luís Rosado; Maria João M. Vasconcelos (HEALTHINF, 2021)

Improving Teledermatology Referral with Edge-AI: Mobile App to Foster Skin Lesion Imaging Standardization. - Maria João M. Vasconcelos; Dinis Moreira; Pedro Alves; Ricardo Graça; Rafael Franco; Luís Rosado (BIOSTEC (Selected Papers), 2021)

Integrating a Head-mounted Display with a Mobile Device for Real-time Augmented Reality Purposes. - Bruno Madeira; Pedro Alves; Anabela Marto; Nuno Rodrigues; Alexandrino Gonçalves (VISIGRAPP (1: GRAPP), 2021)

Power Transformer Design Resorting to Metaheuristics Techniques. - Pedro Alves; Pedro M. Fonte; R. Pereira (DoCEIS, 2021)

A Novel Approach for User Equipment Indoor/Outdoor Classification in Mobile Networks. - Pedro Alves; Thaina Saraiva; Marília Barandas; David Duarte; Dinis Moreira; Ricardo Santos 006; Ricardo Leonardo; Hugo Gamboa; Pedro Vieira 001 (IEEE Access, 2021)

Crowdsourcing-Based Fingerprinting for Indoor Location in Multi-Storey Buildings. - Ricardo Santos 006; Ricardo Leonardo; Marília Barandas; Dinis Moreira; Tiago Rocha; Pedro Alves; João Pedro Oliveira 001; Hugo Gamboa (IEEE Access, 2021)

Human Activity Recognition for Indoor Localization Using Smartphone Inertial Sensors. - Dinis Moreira; Marília Barandas; Tiago Rocha; Pedro Alves; Ricardo Santos 006; Ricardo Leonardo; Pedro Vieira 001; Hugo Gamboa (Sensors, 2021)

Augmented Virtual Reality in Data Visualization. - Pedro Alves; Filipe Portela (ARTIIS (1), 2022)

Footwear segmentation and recommendation supported by deep learning: an exploratory proposal. - João Oliveira; Rui Gomes; Dibet Garcia Gonzalez; Nuno Sousa; Somayeh Shahrabadi; Miguel Guevara 001; Maria José Ferreira; Pedro Alves; Emanuel Peres; Luís Magalhães; Telmo Adão (CENTERIS/ProjMAN/HCist, 2022)

A Sequence to Sequence Long Short-Term Memory Network for Footwear Sales Forecasting. - Luís Santos; Luís Miguel Matos; Luís Ferreira 002; Pedro Alves; Mário Viana; André Luiz Pilastri; Paulo Cortez 001 (IDEAL, 2022)

ANN-based Analog IC Floorplan Recommender with a Broader Topological Constraints Coverage. - Pedro Alves; António Gusmão 001; Nuno Horta; Nuno Lourenço 003; Ricardo Martins 003 (SMACD, 2022)

Smartphone Application for Structural Health Monitoring of Bridges. - Eloi Figueiredo; Ionut Dragos Moldovan; Pedro Alves; Hugo D. Rebelo; Laura Souza (Sensors, 2022)

Drop Project: An automatic assessment tool for programming assignments. - Bruno Pereira Cipriano; Nuno Fachada; Pedro Alves (SoftwareX, 2022)

AI-powered image acquisition and characterisation of dressings for patient-centred wound management. - Pedro Alves; Ana Filipa Sampaio; Nuno Cardoso; Paulo Alves; Pedro Salgado; Maria João M. Vasconcelos (CBMS, 2023)

Leveraging Deep Neural Networks for Automatic and Standardised Wound Image Acquisition. - Ana Filipa Sampaio; Pedro Alves; Nuno Cardoso; Paulo Alves; Raquel Marques; Pedro Salgado; Maria João M. Vasconcelos (ICT4AWE, 2023)

Small Data as a Tool to Predict Player Game Design Preferences: A Qualitative Pilot Study. - Catarina Vieira; Pedro Alves; Jorge Alves; André Perrota (ISD, 2023)

GPT-3 vs Object Oriented Programming Assignments: An Experience Report. - Bruno Pereira Cipriano; Pedro Alves (ITiCSE (1), 2023)

The centaur programmer - How Kasparov's Advanced Chess spans over to the software development of the future. - Pedro Alves; Bruno Pereira Cipriano (CoRR, 2023)

A Picture Is Worth a Thousand Words: Exploring Diagram and Video-Based OOP Exercises to Counter LLM Over-Reliance. - Bruno Pereira Cipriano; Pedro Alves; Paul Denny 001 (EC-TEL (1), 2024)

Seven Years Later: Lessons Learned in Automated Assessment. - Bruno Pereira Cipriano; Pedro Alves (ICPEC, 2024)

LLMs Still Can't Avoid Instanceof: An Investigation Into GPT-3.5, GPT-4 and Bard's Capacity to Handle Object-Oriented Programming Assignments. - Bruno Pereira Cipriano; Pedro Alves (SEET@ICSE, 2024)

Towards the Integration of Large Language Models and Automatic Assessment Tools: Enhancing Student Support in Programming Assignments. - Bruno Pereira Cipriano; Miguel Silva; Rodrigo Correia; Pedro Alves (Koli Calling, 2024)

Bridging the Gap between Project-Oriented and Exercise-Oriented Automatic Assessment Tools. - Bruno Pereira Cipriano; Bernardo Baltazar; Nuno Fachada; Athanasios Vourvopoulos; Pedro Alves (Comput., 2024)

"Give Me the Code": Log Analysis of First-Year CS Students' Interactions with GPT. - Pedro Alves; Bruno Pereira Cipriano (CSEDU (2), 2025)

"ChatGPT Is Here to Help, not to Replace Anybody": An Evaluation of Students' Opinions on Integrating ChatGPT in CS Courses. - Bruno Pereira Cipriano; Pedro Alves (CSEDU (2), 2025)

Clinically Ready Magnetic Microrobots for Targeted Therapies. - Fabian C. Landers; Lukas Hertle; Vitaly Pustovalov; Derick Sivakumaran; Oliver Brinkmann; Kirstin Meiners; Pascal Theiler; Valentin Gantenbein; Andrea Veciana; Michael Mattmann; Silas Riss; Simone Gervasoni; et al. (CoRR, 2025)

Analysis of the navigation of magnetic microrobots through cerebral bifurcations. - Pedro Alves; Maria Pinto; Rosa Moreira; Derick Sivakumaran; Fabian C. Landers; Maria Guix; Bradley J. Nelson; Andreas D. Flouris; Salvador Pané; Josep Puigmartí-Luis; Tiago Sotto Mayor (CoRR, 2025)

Automated Assessment in Mobile Programming Courses: Leveraging GitHub Classroom and Flutter for Enhanced Student Outcomes. - Pedro Alves; Bruno Pereira Cipriano (CoRR, 2025)