PLoS Computational Biology Conference Postcards from ISMB/ECCB 2011. - Pedro Madrigal; Noa Sela; Simon M. Lin (PLoS Comput. Biol., 2011)

Practical Guidelines for the Comprehensive Analysis of ChIP-seq Data. - Timothy Bailey; Pawel Krajewski; Istvan Ladunga; Céline Lefebvre; Qunhua Li; Tao Liu 022; Pedro Madrigal; Cenny Taslim; Jie Zhang (PLoS Comput. Biol., 2013)

Uncovering correlated variabilityin epigenomic datasets usingthe Karhunen-Loeve transform. - Pedro Madrigal; Pawel Krajewski (BioData Min., 2015)

fCCAC: functional canonical correlation analysis to evaluate covariance between nucleic acid sequencing datasets. - Pedro Madrigal (Bioinform., 2017)

Functional data analysis for computational biology. - Marzia A. Cremona; Hongyan Xu; Kateryna D. Makova; Matthew Reimherr; Francesca Chiaromonte; Pedro Madrigal (Bioinform., 2019)