GeneCruiser: a web service for the annotation of microarray data. - Ted Liefeld; Michael Reich; Joshua Gould; Peili Zhang; Pablo Tamayo; Jill P. Mesirov (Bioinform., 2005)

FlyBase: genomes by the dozen. - Madeline A. Crosby; Joshua L. Goodman; Victor B. Strelets; Peili Zhang; William M. Gelbart (Nucleic Acids Res., 2007)

A comprehensive large-scale biomedical knowledge graph for AI-powered data-driven biomedical research. - Yuan Zhang; Xin Sui; Feng Pan; Kaixian Yu; Keqiao Li; Shubo Tian; Arslan Erdengasileng; Qing Han; Wanjing Wang; Jianan Wang; Jian Wang; Donghu Sun; et al. (Nat. Mac. Intell., 2025)