Methy-Pipe: An integrated bioinformatics data analysis pipeline for whole genome methylome analysis. - Peiyong Jiang; Xiaoxi Sun; Eric Z. Chen; Kun Sun 003; Rossa W. K. Chiu; Yuk Ming Dennis Lo; Hao Sun 001 (BIBM Workshops, 2010)

Genome-wide identification of TF-miRNA regulatory networks in myogenesis. - Leina Lu; Liang Zhou; Eric Z. Chen; Kun Sun 003; Peiyong Jiang; Susie Su; Lijun Wang; Hao Sun 001; Huating Wang (BIBM Workshops, 2011)

FetalQuant: deducing fractional fetal DNA concentration from massively parallel sequencing of DNA in maternal plasma. - Peiyong Jiang; K. C. Allen Chan; Gary J. W. Liao; Yama W. L. Zheng; Tak Y. Leung; Rossa W. K. Chiu; Yuk Ming Dennis Lo; Hao Sun 001 (Bioinform., 2012)

Bioinformatics analyses for next-generation sequencing of plasma DNA. - Peiyong Jiang (2012)

Hardware Acceleration of Genetic Sequence Alignment. - James Arram; Kuen Hung Tsoi; Wayne Luk; Peiyong Jiang (ARC, 2013)

Reconfigurable Acceleration of Short Read Mapping. - James Arram; Kuen Hung Tsoi; Wayne Luk; Peiyong Jiang (FCCM, 2013)

Reconfigurable filtered acceleration of short read alignment. - James Arram; Wayne Luk; Peiyong Jiang (FPT, 2013)

Ramethy: Reconfigurable Acceleration of Bisulfite Sequence Alignment. - James Arram; Wayne Luk; Peiyong Jiang (FPGA, 2015)

BSviewer: a genotype-preserving, nucleotide-level visualizer for bisulfite sequencing data. - Kun Sun 003; Fiona F. M. Lun; Peiyong Jiang; Hao Sun 001 (Bioinform., 2017)

Leveraging FPGAs for Accelerating Short Read Alignment. - James Arram; Thomas Kaplan; Wayne Luk; Peiyong Jiang (IEEE ACM Trans. Comput. Biol. Bioinform., 2017)

Light-Weight Permutation Generator for Efficient Convolutional Neural Network Data Augmentation. - Bowen P. Y. Kwan; Ce Guo; Wayne Luk; Peiyong Jiang (ARC, 2022)