An experimentally-supported genome-scale metabolic network reconstruction for Yersinia pestis CO92. - Pep Charusanti; Sadhana Chauhan; Kathleen McAteer; Joshua A. Lerman; Daniel R. Hyduke; Vladimir L. Motin; Charles Ansong; Joshua N. Adkins; Bernhard O. Palsson (BMC Syst. Biol., 2011)

A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2. - Ines Thiele; Daniel R. Hyduke; Benjamin Steeb; Guy Fankam; Douglas K. Allen; Susanna Bazzani; Pep Charusanti; Feng-Chi Chen; Ronan M. T. Fleming; Chao A. Hsiung; Sigrid C. J. De Keersmaecker; Yu-Chieh Liao; et al. (BMC Syst. Biol., 2011)

Understanding system dynamics of an adaptive enzyme network from globally profiled kinetic parameters. - Austin W. T. Chiang; Wei-Chung Liu; Pep Charusanti; Ming-Jing Hwang (BMC Syst. Biol., 2014)