Medical Plan-Analysis: The Attending System. - Perry L. Miller (IJCAI, 1983)

ATTENDING: Critiquing a Physician's Management Plan. - Perry L. Miller (IEEE Trans. Pattern Anal. Mach. Intell., 1983)

Readings in Medical Artificial Intelligence: The First Decade (Book Review). - Perry L. Miller (AI Mag., 1986)

Prose Generation from Expert Systems: An Applied Computational Linguistics Approach. - Perry L. Miller; Glenn D. Rennels (AI Mag., 1988)

A Computational Model of Reasoning from the Clinical Literature. - Glenn D. Rennels; Edward H. Shortliffe; Frank E. Stockdale; Perry L. Miller (AI Mag., 1989)

SENEX: a computer-based representation of cellular signal transduction processes in the central nervous system. - Sheldon S. Ball; Vei H. Mah; Perry L. Miller (Comput. Appl. Biosci., 1991)

Parallel computation and FASTA: confronting the problem of parallel database search for a fast sequence comparison algorithm. - Perry L. Miller; Prakash M. Nadkarni; N. M. Carriero (Comput. Appl. Biosci., 1991)

Real-Time Data Fusion in the Intensive Care Unit. - Michael Factor; David Gelernter; Craig E. Kolb; Perry L. Miller; Dean F. Sittig (Computer, 1991)

Harnessing networked workstations as a powerful parallel computer: a general paradigm illustrated using three programs for genetic linkage analysis. - Perry L. Miller; Prakash M. Nadkarni; P. A. Bercovitz (Comput. Appl. Biosci., 1992)

Comparing machine-independent versus machine-specific parallelization of a software platform for biological sequence comparison. - Perry L. Miller; Prakash M. Nadkarni; William R. Pearson (Comput. Appl. Biosci., 1992)

Parallel Computation for Medicine and Biology: Applications of Linda At Yale University. - Dean F. Sittig; Mark A. Shifman; Prakash M. Nadkarni; Perry L. Miller (Int. J. High Perform. Comput. Appl., 1992)

Computer-assisted restriction mapping: an integrated approach to handling experimental uncertainty. - L. W. Wright; J. B. Lichter; John Reinitz; Mark A. Shifman; Kenneth K. Kidd; Perry L. Miller (Comput. Appl. Biosci., 1994)

Case Report: Trade-offs in Producing Patient-specific Recommendations from a Computer-based Clinical Guideline: A Case Study. - Perry L. Miller; Sandra J. Frawley (J. Am. Medical Informatics Assoc., 1995)

Research Paper: Lessons Learned from a Pilot Implementation of the UMLS Information Sources Map. - Perry L. Miller; Sandra J. Frawley; Lawrence Wright; Nancy K. Roderer; Seth Powsner (J. Am. Medical Informatics Assoc., 1995)

Application of Technology: Internet-based Support for Bioscience Research: A Collaborative Genome center for Human Chromosome 12. - Perry L. Miller; Prakash M. Nadkarni; Kenneth K. Kidd; Kei-Hoi Cheung; David C. Ward; Amy Banks; Patricia Bray-Ward; Lisa Cupelli; Valerie Herdman; Ivonne Marondel; Kate Montcomery; Beatrice Renault; et al. (J. Am. Medical Informatics Assoc., 1995)

Research Paper: Portability Issues for a Structured Clinical Vocabulary: Mapping from Yale to the Columbia Medical Entities Dictionary. - Joseph L. Kannry; Lawrence Wright; Mark A. Shifman; Scot M. Silverstein; Perry L. Miller (J. Am. Medical Informatics Assoc., 1996)

Application of Technology: ModelDB: An Environment for Running and Storing Computational Models and Their Results Applied to Neuroscience. - Bret E. Peterson; Matthew D. Healy; Prakash M. Nadkarni; Perry L. Miller; Gordon M. Shepherd (J. Am. Medical Informatics Assoc., 1996)

DNA Workbench: A Database Package to Manage Regional Physical Mapping. - Prakash M. Nadkarni; Kei-Hoi Cheung; C. Castiglione; Perry L. Miller; Kenneth K. Kidd (J. Comput. Biol., 1996)

Using Coded Semantic Relationships to Retrieve and Structure Clinical Reference Information. - Cynthia Brandt; Lori A. Fernandes; Seth Powsner; Keith J. Ruskin; Perry L. Miller (AMIA, 1997)

Toward the Systematic Maintenance of Different Versions of Rule-Based Immunization Guideline Logic. - Sandra J. Frawley; Perry L. Miller; Frederick G. Sayward; William A. Yasnoff (AMIA, 1997)

A prototype Web site for immunization knowledge maintenance. - Perry L. Miller; Sandra J. Frawley; Cynthia Brandt; Frederick G. Sayward (AMIA, 1997)

Demonstration of Computer-Based Forecasting for Childhood Immunization and Related Knowledge Maintenance Tools. - Perry L. Miller; Sandra J. Frawley; Frederick G. Sayward; William A. Yasnoff (AMIA, 1997)

Using explicitly represented biological relationships for database navigation and searching via the World-Wide Web. - S. Panzer; L. Cooley; Perry L. Miller (Comput. Appl. Biosci., 1997)

Research Paper: Evaluating IAIMS at Yale: Information Access. - Susan E. Grajek; Pascal V. Calarco; Sandra J. Frawley; James McKay; Perry L. Miller; John A. Paton; Nancy K. Roderer; Joseph E. Sullivan (J. Am. Medical Informatics Assoc., 1997)

ACT/DB: A Clinical Trials Database Being Refined on a Pilot Basis at Two Medical Centers. - Cynthia Brandt; Prakash M. Nadkarni; Lee Schacter; Daniel Zelterman; Yuli Li; John M. Fisk; Edward K. Shultz; Perry L. Miller (AMIA, 1998)

Automatic query mapping among genomic databases: a pilot exploration. - Kei-Hoi Cheung; Prakash M. Nadkarni; Perry L. Miller; Dong-Guk Shin (AMIA, 1998)

Issues in accommodating national changes and local variation in a computer-based guideline for childhood immunization and in related knowledge maintenance tools. - Perry L. Miller; Sandra J. Frawley; Frederick G. Sayward (AMIA, 1998)

Acquiring, Storing and Retrieving Diverse Biomedical Data Using the World-Wide-Web: The SenseLab Paradigm. - Emmanouil Skoufos; Jason S. Mirsky; Matthew D. Healy; Michael S. Singer; Michael L. Hines; Prakash M. Nakardi; Perry L. Miller; Gordon M. Shepherd (AMIA, 1998)

Application of Technology: Managing Attribute-Value Clinical Trials Data Using the ACT/DB Client-Server Database System. - Prakash M. Nadkarni; Cynthia Brandt; Sandra J. Frawley; Frederick G. Sayward; Robin Einbinder; Daniel Zelterman; Lee Schacter; Perry L. Miller (J. Am. Medical Informatics Assoc., 1998)

Issues in Implementing a Guideline for Depression Modeled Using an Object-Oriented State Machine. - Roland Chen; Richard N. Shiffman; Perry L. Miller; C. Bruce Baker (AMIA, 1999)

Neuronal database integration: the Senselab EAV data model. - Luis N. Marenco; Prakash M. Nadkarni; Emmanouil Skoufos; Gordon M. Shepherd; Perry L. Miller (AMIA, 1999)

Demonstration of TrialTracker: A Customizable Database for Managing Administrative Data for Clinical Trials. - Perry L. Miller; Sandra J. Frawley; Charles Lu 003; Karleen Hanna; Michael Ezekowitz (AMIA, 1999)

Exploring three approaches for handling incomplete patient histories in a computer-based guideline for childhood immunization. - Perry L. Miller; Sandra J. Frawley; Frederick G. Sayward (AMIA, 1999)

Application of Information Technology: Organization of Heterogeneous Scientific Data Using the EAV/CR Representation. - Prakash M. Nadkarni; Luis N. Marenco; Roland Chen; Emmanouil Skoufos; Gordon M. Shepherd; Perry L. Miller (J. Am. Medical Informatics Assoc., 1999)

Olfactory Receptor Database: a database of the largest eukaryotic gene family. - Emmanouil Skoufos; Matthew D. Healy; Michael S. Singer; Prakash M. Nadkarni; Perry L. Miller; Gordon M. Shepherd (Nucleic Acids Res., 1999)

Graphically-enabled integration of bioinformatics tools allowing parallel execution. - Kei-Hoi Cheung; Perry L. Miller; A. H. Sherman; Stephen B. Weston; Eric Stratmann; Martin H. Schultz; Michael Snyder 001; Anuj Kumar (AMIA, 2000)

The SenseLab Database: System Design Towards Interoperability. - Luis N. Marenco; Prakash M. Nadkarni; Perry L. Miller; Gordon M. Shepherd (AMIA, 2000)

Informatics issues in the national dissemination of a computer-based clinical guideline: a case study in childhood immunization. - Perry L. Miller; Sandra J. Frawley; Frederick G. Sayward (AMIA, 2000)

Research Paper: Exploring Performance Issues for a Clinical Database Organized Using an Entity-Attribute-Value Representation. - Roland Chen; Prakash M. Nadkarni; Luis N. Marenco; Forrest W. Levin; Joseph Erdos; Perry L. Miller (J. Am. Medical Informatics Assoc., 2000)

Research Paper: PathMaster: Content-based Cell Image Retrieval Using Automated Feature Extraction. - Mark E. Mattie; Lawrence H. Staib; Eric Stratmann; Hemant D. Tagare; James S. Duncan; Perry L. Miller (J. Am. Medical Informatics Assoc., 2000)

Viewpoint: Opportunities at the Intersection of Bioinformatics and Health Informatics: A Case Study. - Perry L. Miller (J. Am. Medical Informatics Assoc., 2000)

Research Paper: Exploring the Degree of Concordance of Coded and Textual Data in Answering Clinical Queries from a Clinical Data Repository. - H. David Stein; Prakash M. Nadkarni; Joseph Erdos; Perry L. Miller (J. Am. Medical Informatics Assoc., 2000)

IMM/Scrub: A Domain-Specific Tool for the Deduplication of Vaccination History Records in Childhood Immunization Registries. - Perry L. Miller; Sandra J. Frawley; Frederick G. Sayward (Comput. Biomed. Res., 2000)

ALFRED: an allele frequency database for diverse populations and DNA polymorphisms. - Kei-Hoi Cheung; Michael V. Osier; Judith R. Kidd; Andrew J. Pakstis; Perry L. Miller; Kenneth K. Kidd (Nucleic Acids Res., 2000)

TRIPLES: a database of gene function in Saccharomyces cerevisiae. - Anuj Kumar; Kei-Hoi Cheung; Petra Ross-MacDonald; Paulo S. R. Coelho; Perry L. Miller; Michael Snyder 001 (Nucleic Acids Res., 2000)

Olfactory Receptor Database: a sensory chemoreceptor resource. - Emmanouil Skoufos; Luis N. Marenco; Prakash M. Nadkarni; Perry L. Miller; Gordon M. Shepherd (Nucleic Acids Res., 2000)

A metadata framework for interoperating heterogeneous genome data using XML. - Kei-Hoi Cheung; Aniruddha M. Deshpande; Nick P. Tosches; S. Nath; A. Agrawal; Perry L. Miller; Anuj Kumar; Michael Snyder 001 (AMIA, 2001)

A Pilot Approach to Automated and Efficient Transfer of Neuroscience Data from Journal Articles to Searchable Databases. - Chiquito J. Crasto; Luis N. Marenco; Prakash M. Nadkarni; Perry L. Miller; Gordon M. Shepherd (AMIA, 2001)

An XML Application For Genomic Data Interoperation. - Kei-Hoi Cheung; Yang Liu 023; Anuj Kumar; Michael Snyder 001; Mark Gerstein; Perry L. Miller (BIBE, 2001)

Application of Information Technology: Domain-constrained Generation of Clinical Condition Sets to Help Test Computer-based Clinical Guidelines. - Perry L. Miller (J. Am. Medical Informatics Assoc., 2001)

Synthesis of Research: Integration of Multidisciplinary Sensory Data: A Pilot Model of the Human Brain Project Approach. - Perry L. Miller; Prakash M. Nadkarni; Michael S. Singer; Luis N. Marenco; Michael L. Hines; Gordon M. Shepherd (J. Am. Medical Informatics Assoc., 2001)

Exploring the Utility of Demographic Data and Vaccination History Data in the Deduplication of Immunization Registry Patient Records. - Perry L. Miller; Sandra J. Frawley; Frederick G. Sayward (J. Biomed. Informatics, 2001)

Maintaining and Incrementally Revalidating a Computer-Based Clinical Guideline: A Case Study. - Perry L. Miller; Sandra J. Frawley; Frederick G. Sayward (J. Biomed. Informatics, 2001)

ALFRED: an allele frequency database for diverse populations and DNA polymorphisms - an update. - Michael V. Osier; Kei-Hoi Cheung; Judith R. Kidd; Andrew J. Pakstis; Perry L. Miller; Kenneth K. Kidd (Nucleic Acids Res., 2001)

YMD: a microarray database for large-scale gene expression analysis. - Kei-Hoi Cheung; Kevin P. White; Janet Hager; Mark Gerstein; Valerie Reinke; Kenneth Nelson; Peter Masiar; Ranjana Srivastava; Yuli Li; Ju Li; Hongyu Zhao 003; Jinming Li; et al. (AMIA, 2002)

Metadata-driven creation of data marts from an EAV-modeled clinical research database. - Cynthia Brandt; Richard Morse; Keri Matthews; Kexin Sun; Aniruddha M. Deshpande; Rohit Gadagkar; Dorothy B. Cohen; Perry L. Miller; Prakash M. Nadkarni (Int. J. Medical Informatics, 2002)

Case Study: Exploring Issues of Quality of Service in a Next Generation Internet Testbed: A Case Study Using PathMaster. - Mark A. Shifman; Frederick G. Sayward; Mark E. Mattie; Perry L. Miller (J. Am. Medical Informatics Assoc., 2002)

A dynamic approach to mapping coordinates between microplates and microarrays. - Kei-Hoi Cheung; Janet Hager; Kenneth Nelson; Kevin P. White; Yuli Li; Michael Snyder 001; Kenneth R. Williams; Perry L. Miller (J. Biomed. Informatics, 2002)

Olfactory Receptor Database: a metadata-driven automated population from sources of gene and protein sequences. - Chiquito J. Crasto; Luis N. Marenco; Perry L. Miller; Gordon M. Shepherd (Nucleic Acids Res., 2002)

The TRIPLES database: a community resource for yeast molecular biology. - Anuj Kumar; Kei-Hoi Cheung; Nick P. Tosches; Peter Masiar; Yang Liu 023; Perry L. Miller; Michael Snyder 001 (Nucleic Acids Res., 2002)

TrialDB: A Web-based Clinical Study Data Management System AMIA 2003 Open Source Expo. - Cynthia Brandt; Aniruddha M. Deshpande; Charles Lu 003; Gowri Ananth; Kexin Sun; Rohit Gadagkar; Richard Morse; Cesar Rodriguez; Perry L. Miller; Prakash M. Nadkarni (AMIA, 2003)

The Integration of Similar Clinical Research Data Collection Instruments. - Dorothy B. Cohen; Sandra J. Frawley; Mark A. Shifman; Perry L. Miller; Cynthia Brandt (AMIA, 2003)

Creating Knowledgebases to Text-Mine PUBMED Articles Using Clustering Techniques. - Chiquito J. Crasto; Thomas M. Morse; Michele Migliore; Prakash M. Nadkarni; Michael L. Hines; Douglas E. Brash; Perry L. Miller; Gordon M. Shepherd (AMIA, 2003)

Application of Information Technology: Achieving Evolvable Web-Database Bioscience Applications Using the EAV/CR Framework: Recent Advances. - Luis N. Marenco; Nicholas P. Tosches; Chiquito J. Crasto; Gordon M. Shepherd; Perry L. Miller; Prakash M. Nadkarni (J. Am. Medical Informatics Assoc., 2003)

ALFRED: the ALelle FREquency Database. Update. - Haseena Rajeevan; Michael V. Osier; Kei-Hoi Cheung; H. Deng; L. Druskin; R. Heinzen; Judith R. Kidd; S. Stein; Andrew J. Pakstis; Nick P. Tosches; C.-C. Yeh; Perry L. Miller; et al. (Nucleic Acids Res., 2003)

Text mining neuroscience journal articles to populate neuroscience databases. - Chiquito J. Crasto; Luis N. Marenco; Michele Migliore; Buqing Mao; Prakash M. Nadkarni; Perry L. Miller; Gordon M. Shepherd (Neuroinformatics, 2003)

Neuroscience data and tool sharing - A legal and policy framework for neuroinformatics. - Peter Eckersley; Gary F. Egan; Erik De Schutter; Yiyuan Tang; Mirko Novak; Václav Sebesta; Line Matthiessen; Iiro P. Jääskeläinen; Ulla Ruotsalainen; Andreas V. M. Herz; K. Peter Hoffmann; Raphael Ritz; et al. (Neuroinformatics, 2003)

Towards effective and rewarding data sharing. - Daniel Gardner; Arthur W. Toga; Giorgio A. Ascoli; Jackson T. Beatty; James F. Brinkley; Anders M. Dale; Peter T. Fox; Esther P. Gardner; John S. George; Nigel H. Goddard; Kristen M. Harris; Edward Herskovits; et al. (Neuroinformatics, 2003)

White Paper: Training the Next Generation of Informaticians: The Impact of "BISTI" and Bioinformatics - A Report from the American College of Medical Informatics. - Charles P. Friedman; Russ B. Altman; Isaac S. Kohane; Kathleen A. McCormick; Perry L. Miller; Judy G. Ozbolt; Edward H. Shortliffe; Gary D. Stormo; M. Cleat Szczepaniak; David Tuck; Jeffrey J. Williamson (J. Am. Medical Informatics Assoc., 2004)

Model Formulation: QIS: A Framework for Biomedical Database Federation. - Luis N. Marenco; Tzuu-Yi Wang; Gordon M. Shepherd; Perry L. Miller; Prakash M. Nadkarni (J. Am. Medical Informatics Assoc., 2004)

Case Report: Exploring the Portability of Informatics Capabilities from a Clinical Application to a Bioscience Application. - Mark A. Shifman; Ranjana Srivastava; Cynthia Brandt; Tong-Ruei Li; Kevin P. White; Perry L. Miller (J. Am. Medical Informatics Assoc., 2004)

KARMA: a web server application for comparing and annotating heterogeneous microarray platforms. - Kei-Hoi Cheung; Janet Hager; Deyun Pan; Ranjana Srivastava; Shrikant M. Mane; Yuli Li; Perry L. Miller; Kenneth R. Williams (Nucleic Acids Res., 2004)

Informatics approaches to functional MRI odor mapping of the rodent olfactory bulb - OdorMapBuilder and OdorMapDB. - Nian Liu; Fuqiang Xu; Luis N. Marenco; Fahmeed Hyder; Perry L. Miller; Gordon M. Shepherd (Neuroinformatics, 2004)

YPED: A Proteomics Database for Protein Expression Analysis. - Mark A. Shifman; Kexin Sun; Christopher M. Colangelo; Kei-Hoi Cheung; Perry L. Miller; Kenneth R. Williams (AMIA, 2005)

Case Report: A High Productivity/Low Maintenance Approach to High-performance Computation for Biomedicine: Four Case Studies. - Nicholas Carriero; Michael V. Osier; Kei-Hoi Cheung; Perry L. Miller; Mark Gerstein; Hongyu Zhao 003; Baolin Wu; Scott Rifkin; Joseph T. Chang; Heping Zhang; Kevin P. White; Kenneth R. Williams; et al. (J. Am. Medical Informatics Assoc., 2005)

Using Web Ontology Language to Integrate Heterogeneous Databases in the Neurosciences. - Hugo Y. K. Lam; Luis N. Marenco; Gordon M. Shepherd; Perry L. Miller; Kei-Hoi Cheung (AMIA, 2006)

Design Issues in Implementing a Portable Sample Tracking and Analysis Research Support (STARS) System for PCR Based Microarray Research. - Frederick G. Sayward; Jin Yang; Kenneth Nelson; Ghia Euskirchen; Alexander E. Urban; Paul Bertone; John Rinn; Sherman Weissman; Mark Gerstein; Michael Snyder 001; Perry L. Miller (CISS, 2006)

Application of Information Technology: ResourceLog: An Embeddable Tool for Dynamically Monitoring the Usage of Web-Based Bioscience Resources. - Nian Liu; Luis N. Marenco; Perry L. Miller (J. Am. Medical Informatics Assoc., 2006)

SenseLab: new developments in disseminating neuroscience information. - Chiquito J. Crasto; Luis N. Marenco; Nian Liu; Thomas M. Morse; Kei-Hoi Cheung; Peter C. Lai; Gautam Bahl; Peter Masiar; Hugo Y. K. Lam; Ernest Lim; Huajun Chen; Prakash M. Nadkarni; et al. (Briefings Bioinform., 2007)

AlzPharm: integration of neurodegeneration data using RDF. - Hugo Y. K. Lam; Luis N. Marenco; Tim Clark; Yong Gao; June Kinoshita; Gordon M. Shepherd; Perry L. Miller; Elizabeth Wu; Gwendolyn T. Wong; Nian Liu; Chiquito J. Crasto; Thomas M. Morse; et al. (BMC Bioinform., 2007)

Application of Information Technology: Dynamic Tables: An Architecture for Managing Evolving, Heterogeneous Biomedical Data in Relational Database Management Systems. - John Corwin; Avi Silberschatz; Perry L. Miller; Luis N. Marenco (J. Am. Medical Informatics Assoc., 2007)

Case Report: NeuroExtract: Facilitating Neuroscience-oriented Retrieval from Broadly-focused Bioscience Databases Using Text-based Query Mediation. - Chiquito J. Crasto; Peter Masiar; Perry L. Miller (J. Am. Medical Informatics Assoc., 2007)

Integrating domain knowledge with statistical and data mining methods for high-density genomic SNP disease association analysis. - Valentin Dinu; Hongyu Zhao 003; Perry L. Miller (J. Biomed. Informatics, 2007)

An interdepartmental Ph.D. program in computational biology and bioinformatics: The Yale perspective. - Mark Gerstein; Dov Greenbaum; Kei-Hoi Cheung; Perry L. Miller (J. Biomed. Informatics, 2007)

OdorMapComparer: An Application for Quantitative Analyses and Comparisons of fMRI Brain Odor Maps. - Nian Liu; Fuqiang Xu; Perry L. Miller; Gordon M. Shepherd (Neuroinformatics, 2007)

The Neuroscience Information Framework: A Data and Knowledge Environment for Neuroscience. - Daniel Gardner; Huda Akil; Giorgio A. Ascoli; Douglas M. Bowden; William J. Bug; Duncan E. Donohue; David H. Goldberg; Bernice Grafstein; Jeffrey S. Grethe; Amarnath Gupta; Maryam Halavi; David N. Kennedy; et al. (Neuroinformatics, 2008)

Federated Access to Heterogeneous Information Resources in the Neuroscience Information Framework (NIF). - Amarnath Gupta; William J. Bug; Luis N. Marenco; Xufei Qian; Christopher Condit; Arun Rangarajan; Hans-Michael Müller; Perry L. Miller; Brian Sanders; Jeffrey S. Grethe; Vadim Astakhov; Gordon M. Shepherd; et al. (Neuroinformatics, 2008)

The NIF LinkOut Broker: A Web Resource to Facilitate Federated Data Integration using NCBI Identifiers. - Luis N. Marenco; Giorgio A. Ascoli; Maryann E. Martone; Gordon M. Shepherd; Perry L. Miller (Neuroinformatics, 2008)

Issues in the Design of a Pilot Concept-Based Query Interface for the Neuroinformatics Information Framework. - Luis N. Marenco; Yuli Li; Maryann E. Martone; Paul W. Sternberg; Gordon M. Shepherd; Perry L. Miller (Neuroinformatics, 2008)

Entrez Neuron RDFa: A Pragmatic Semantic Web Application for Data Integration in Neuroscience Research. - Matthias Samwald; Ernest Lim; Peter Masiar; Luis N. Marenco; Huajun Chen; Thomas M. Morse; Pradeep Mutalik; Gordon M. Shepherd; Perry L. Miller; Kei-Hoi Cheung (MIE, 2009)

Approaches to neuroscience data integration. - Kei-Hoi Cheung; Ernest Lim; Matthias Samwald; Huajun Chen; Luis N. Marenco; Matthew Holford; Thomas M. Morse; Pradeep Mutalik; Gordon M. Shepherd; Perry L. Miller (Briefings Bioinform., 2009)

Semantic SenseLab: Implementing the vision of the Semantic Web in neuroscience. - Matthias Samwald; Huajun Chen; Alan Ruttenberg; Ernest Lim; Luis N. Marenco; Perry L. Miller; Gordon M. Shepherd; Kei-Hoi Cheung (Artif. Intell. Medicine, 2010)

The NIF DISCO Framework: Facilitating Automated Integration of Neuroscience Content on the Web. - Luis N. Marenco; Rixin Wang; Gordon M. Shepherd; Perry L. Miller (Neuroinformatics, 2010)

Towards a Clinically Efficient Model for Clinical Decision Support Linked to the VA EMR: A Pilot System for Neuropathic Pain. - Michael Phipps; Hajime Tokuno; Nallakkandi Rajeevan; Forrest W. Levin; Sandra J. Frawley; Cynthia Brandt; Perry L. Miller (AMIA, 2012)

Training the Informatics Research Workforce, Part 2. - Valerie Florance; Perry L. Miller; Lucila Ohno-Machado; George Hripcsak; William R. Hersh; George Demiris (AMIA, 2013)

Extending the NIF DISCO framework to automate complex workflow: coordinating the harvest and integration of data from diverse neuroscience information resources. - Luis N. Marenco; Rixin Wang; Anita E. Bandrowski; Jeffrey S. Grethe; Gordon M. Shepherd; Perry L. Miller (Frontiers Neuroinformatics, 2014)

SenseLab: Integration of Multidisciplinary Neuroscience Data. - Gordon M. Shepherd; Thomas M. Morse; Luis N. Marenco; Kei-Hoi Cheung; Ted Carnevale; Michele Migliore; Robert A. McDougal; Michael L. Hines; Perry L. Miller (Encyclopedia of Computational Neuroscience, 2014)

Automating Identification of OEF/OIF Veterans Diagnosed with ALS. - Jennifer M. Aucoin; Shon G. Michael; Amy Justice; Perry L. Miller; Cynthia Brandt; Huned Patwa (AMIA, 2015)

Using the Adverse Event Reporting System: Can Analysis be Streamlined by Text Processing? - Andrea L. Benin; Samah J. Fodeh; Michele Koss; Kyle Lee; Perry L. Miller; Cynthia Brandt (AMIA, 2015)

Feature Selection Based LapSVM to Classify Medical Event Reports and Enhance Patient Safety. - Samah J. Fodeh; Cynthia Brandt; Perry L. Miller; Michele Koss; Andrea L. Benin (AMIA, 2015)

Laplacian SVM Based Feature Selection Improves Medical Event Reports Classification. - Samah Jamal Fodeh; Andrea L. Benin; Perry L. Miller; Kyle Lee; Michele Koss; Cynthia Brandt (ICDM Workshops, 2015)

YPED: An Integrated Bioinformatics Suite and Database for Mass Spectrometry-based Proteomics Research. - Christopher M. Colangelo; Mark A. Shifman; Kei-Hoi Cheung; Kathryn L. Stone; Nicholas Carriero; Erol E. Gulcicek; TuKiet T. Lam; Terence Wu; Robert D. Bjornson; Can Bruce; Angus C. Nairn; Jesse Rinehart; et al. (Genom. Proteom. Bioinform., 2015)

Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience. - Robert A. McDougal; Thomas M. Morse; Ted Carnevale; Luis N. Marenco; Rixin Wang; Michele Migliore; Perry L. Miller; Gordon M. Shepherd; Michael L. Hines (J. Comput. Neurosci., 2017)

Utilizing patient data from the veterans administration electronic health record to support web-based clinical decision support: informatics challenges and issues from three clinical domains. - Nallakkandi Rajeevan; Kristina M. Niehoff; Peter Charpentier; Forrest L. Levin; Amy Justice; Cynthia Brandt; Terri R. Fried; Perry L. Miller (BMC Medical Informatics Decis. Mak., 2017)