Effects of biophysical and physiologic parameters on brain activation-induced R2* and R2 changes: Simulations using a deterministic diffusion model. - Peter A. Bandettini; Eric C. Wong (Int. J. Imaging Syst. Technol., 1995)

Spatial Heterogeneity of the Nonlinear Dynamics in the FMRI BOLD Response. - Rasmus M. Birn; Ziad S. Saad; Peter A. Bandettini (NeuroImage, 2001)

Detection versus Estimation in Event-Related fMRI: Choosing the Optimal Stimulus Timing. - Rasmus M. Birn; Robert W. Cox; Peter A. Bandettini (NeuroImage, 2002)

Task-Independent Functional Brain Activity Correlation with Skin Conductance Changes: An fMRI Study. - James C. Patterson II; Leslie G. Ungerleider; Peter A. Bandettini (NeuroImage, 2002)

The spatial extent of the BOLD response. - Ziad S. Saad; Kristina M. Ropella; Edgar A. DeYoe; Peter A. Bandettini (NeuroImage, 2003)

Experimental designs and processing strategies for fMRI studies involving overt verbal responses. - Rasmus M. Birn; Robert W. Cox; Peter A. Bandettini (NeuroImage, 2004)

The effect of stimulus duty cycle and "off" duration on BOLD response linearity. - Rasmus M. Birn; Peter A. Bandettini (NeuroImage, 2005)

The role of the human amygdala in the production of conditioned fear responses. - David C. Knight; Hanh T. Nguyen; Peter A. Bandettini (NeuroImage, 2005)

The neuroscientific exploitation of high-resolution functional magnetic resonance imaging. - Nikolaus Kriegeskorte; Peter A. Bandettini (EMBC, 2006)

Improved BOLD detection in the medial temporal region using parallel imaging and voxel volume reduction. - Patrick S. F. Bellgowan; Peter A. Bandettini; Peter van Gelderen; Alex Martin; Jerzy Bodurka (NeuroImage, 2006)

Separating respiratory-variation-related fluctuations from neuronal-activity-related fluctuations in fMRI. - Rasmus M. Birn; Jason B. Diamond; Monica A. Smith; Peter A. Bandettini (NeuroImage, 2006)

Mapping the MRI voxel volume in which thermal noise matches physiological noise - Implications for fMRI. - Jerzy Bodurka; F. Ye; Natalia Petridou; Kevin Murphy 001; Peter A. Bandettini (NeuroImage, 2007)

Analyzing for information, not activation, to exploit high-resolution fMRI. - Nikolaus Kriegeskorte; Peter A. Bandettini (NeuroImage, 2007)

Combining the tools: Activation- and information-based fMRI analysis. - Nikolaus Kriegeskorte; Peter A. Bandettini (NeuroImage, 2007)

How long to scan? The relationship between fMRI temporal signal to noise ratio and necessary scan duration. - Kevin Murphy 001; Jerzy Bodurka; Peter A. Bandettini (NeuroImage, 2007)

Artifactual time-course correlations in echo-planar fMRI with implications for studies of brain function. - Nikolaus Kriegeskorte; Jerzy Bodurka; Peter A. Bandettini (Int. J. Imaging Syst. Technol., 2008)

Differential transient MEG and fMRI responses to visual stimulation onset rate. - August S. Tuan; Rasmus M. Birn; Peter A. Bandettini; Geoffrey M. Boynton (Int. J. Imaging Syst. Technol., 2008)

The respiration response function: The temporal dynamics of fMRI signal fluctuations related to changes in respiration. - Rasmus M. Birn; Monica A. Smith; Tyler B. Jones; Peter A. Bandettini (NeuroImage, 2008)

Neural correlates of unconditioned response diminution during Pavlovian conditioning. - Joseph E. Dunsmoor; Peter A. Bandettini; David C. Knight (NeuroImage, 2008)

Integration of motion correction and physiological noise regression in fMRI. - Tyler B. Jones; Peter A. Bandettini; Rasmus M. Birn (NeuroImage, 2008)

fMRI in the presence of task-correlated breathing variations. - Rasmus M. Birn; Kevin Murphy 001; Daniel A. Handwerker; Peter A. Bandettini (NeuroImage, 2009)

Neural substrates of explicit and implicit fear memory. - David C. Knight; Najah S. Waters; Peter A. Bandettini (NeuroImage, 2009)

The impact of global signal regression on resting state correlations: Are anti-correlated networks introduced? - Kevin Murphy 001; Rasmus M. Birn; Daniel A. Handwerker; Tyler B. Jones; Peter A. Bandettini (NeuroImage, 2009)

Functional but not structural changes associated with learning: An exploration of longitudinal Voxel-Based Morphometry (VBM). - Adam G. Thomas; Sean Marrett; Ziad S. Saad; Douglas A. Ruff; Alex Martin; Peter A. Bandettini (NeuroImage, 2009)

Neural systems supporting lexical search guided by letter and semantic category cues: A self-paced overt response fMRI study of verbal fluency. - Rasmus M. Birn; Lauren Kenworthy; Laura K. Case; Rachel Caravella; Tyler B. Jones; Peter A. Bandettini; Alex Martin (NeuroImage, 2010)

Sources of group differences in functional connectivity: An investigation applied to autism spectrum disorder. - Tyler B. Jones; Peter A. Bandettini; Lauren Kenworthy; Laura K. Case; Shawn C. Milleville; Alex Martin; Rasmus M. Birn (NeuroImage, 2010)

Learning-related diminution of unconditioned SCR and fMRI signal responses. - David C. Knight; Najah S. Waters; Margaret K. King; Peter A. Bandettini (NeuroImage, 2010)

How does an fMRI voxel sample the neuronal activity pattern: Compact-kernel or complex spatiotemporal filter? - Nikolaus Kriegeskorte; Rhodri Cusack; Peter A. Bandettini (NeuroImage, 2010)

Comparison of multivariate classifiers and response normalizations for pattern-information fMRI. - Masaya Misaki; Youn Kim; Peter A. Bandettini; Nikolaus Kriegeskorte (NeuroImage, 2010)

Measuring the Consistency of Global Functional Connectivity Using Kernel Regression Methods. - Carlton Chu; Daniel A. Handwerker; Peter A. Bandettini; John Ashburner (PRNI, 2011)

Physiological noise effects on the flip angle selection in BOLD fMRI. - Javier Gonzalez-Castillo; Vinai Roopchansingh; Peter A. Bandettini; Jerzy Bodurka (NeuroImage, 2011)

Hemodynamic signals not predicted? Not so: A comment on Sirotin and Das (2009). - Daniel A. Handwerker; Peter A. Bandettini (NeuroImage, 2011)

Simple explanations before complex theories: Alternative interpretations of Sirotin and Das' observations. - Daniel A. Handwerker; Peter A. Bandettini (NeuroImage, 2011)

Functional MRI: A confluence of fortunate circumstances. - Peter A. Bandettini (NeuroImage, 2012)

Twenty years of functional MRI: The science and the stories. - Peter A. Bandettini (NeuroImage, 2012)

Sewer pipe, wire, epoxy, and finger tapping: The start of fMRI at the Medical College of Wisconsin. - Peter A. Bandettini (NeuroImage, 2012)

Does feature selection improve classification accuracy? Impact of sample size and feature selection on classification using anatomical magnetic resonance images. - Carlton Chu; Ai-Ling Hsu; Kun-Hsien Chou; Peter A. Bandettini; Ching-Po Lin (NeuroImage, 2012)

The continuing challenge of understanding and modeling hemodynamic variation in fMRI. - Daniel A. Handwerker; Javier Gonzalez-Castillo; Mark D'Esposito; Peter A. Bandettini (NeuroImage, 2012)

Periodic changes in fMRI connectivity. - Daniel A. Handwerker; Vinai Roopchansingh; Javier Gonzalez-Castillo; Peter A. Bandettini (NeuroImage, 2012)

Differentiating BOLD and non-BOLD signals in fMRI time series using multi-echo EPI. - Prantik Kundu; Souheil J. Inati; Jennifer W. Evans; Wen-Ming Luh; Peter A. Bandettini (NeuroImage, 2012)

Characteristic cortical thickness patterns in adolescents with autism spectrum disorders: Interactions with age and intellectual ability revealed by canonical correlation analysis. - Masaya Misaki; Gregory L. Wallace; Nathan Dankner; Alex Martin; Peter A. Bandettini (NeuroImage, 2012)

The danger of systematic bias in group-level FMRI-lag-based causality estimation. - Stephen M. Smith 001; Peter A. Bandettini; Karla L. Miller; T. E. J. Behrens; Karl J. Friston; Olivier David 001; Thomas T. Liu; Mark William Woolrich; Thomas E. Nichols (NeuroImage, 2012)

Generalized RAICAR: Discover homogeneous subject (sub)groups by reproducibility of their intrinsic connectivity networks. - Zhi Yang; Xi-Nian Zuo; Peipei Wang; Zhihao Li 003; Stephen LaConte; Peter A. Bandettini; Xiaoping Philip Hu (NeuroImage, 2012)

Effective Preprocessing Procedures Virtually Eliminate Distance-Dependent Motion Artifacts in Resting State FMRI. - Hang Joon Jo; Stephen J. Gotts; Richard C. Reynolds; Peter A. Bandettini; Alex Martin; Robert W. Cox; Ziad S. Saad (J. Appl. Math., 2013)

Effects of image contrast on functional MRI image registration. - Javier Gonzalez-Castillo; Kristen N. Duthie; Ziad S. Saad; Carlton Chu; Peter A. Bandettini; Wen-Ming Luh (NeuroImage, 2013)

Dynamic functional connectivity: Promise, issues, and interpretations. - R. Matthew Hutchison; Thilo Womelsdorf; Elena A. Allen; Peter A. Bandettini; Vince D. Calhoun; Maurizio Corbetta; Stefania Della Penna; Jeff H. Duyn; Gary H. Glover; Javier Gonzalez-Castillo; Daniel A. Handwerker; Shella D. Keilholz; et al. (NeuroImage, 2013)

Accurate decoding of sub-TR timing differences in stimulations of sub-voxel regions from multi-voxel response patterns. - Masaya Misaki; Wen-Ming Luh; Peter A. Bandettini (NeuroImage, 2013)

Resting-state fMRI confounds and cleanup. - Kevin Murphy 001; Rasmus M. Birn; Peter A. Bandettini (NeuroImage, 2013)

Neuronal or Hemodynamic? Grappling with the Functional MRI Signal. - Peter A. Bandettini (Brain Connect., 2014)

Differentiating BOLD and non-BOLD signals in fMRI time series from anesthetized rats using multi-echo EPI at 11.7T. - Prantik Kundu; Mathieu D. Santin; Peter A. Bandettini; Edward T. Bullmore; Alexandra Petiet (NeuroImage, 2014)

Connectivity trajectory across lifespan differentiates the precuneus from the default network. - Zhi Yang; Catie Chang; Ting Xu 001; Lili Jiang; Daniel A. Handwerker; F. Xavier Castellanos; Michael P. Milham; Peter A. Bandettini; Xi-Nian Zuo (NeuroImage, 2014)

Using fMRI to decode true thoughts independent of intention to conceal. - Zhi Yang; Zirui Huang; Javier Gonzalez-Castillo; Rui Dai; Georg Northoff; Peter A. Bandettini (NeuroImage, 2014)

Separating slow BOLD from non-BOLD baseline drifts using multi-echo fMRI. - Jennifer W. Evans; Prantik Kundu; Silvina G. Horovitz; Peter A. Bandettini (NeuroImage, 2015)

Enhanced identification of BOLD-like components with multi-echo simultaneous multi-slice (MESMS) fMRI and multi-echo ICA. - Valur T. Olafsson; Prantik Kundu; Eric C. Wong; Peter A. Bandettini; Thomas T. Liu (NeuroImage, 2015)

Evaluation of multi-echo ICA denoising for task based fMRI studies: Block designs, rapid event-related designs, and cardiac-gated fMRI. - Javier Gonzalez-Castillo; Puja Panwar; Laura C. Buchanan; César Caballero-Gaudes; Daniel A. Handwerker; David C. Jangraw; Valentinos Zachariou; Souheil J. Inati; Vinai Roopchansingh; John A. Derbyshire; Peter A. Bandettini (NeuroImage, 2016)

Multi-modal characterization of rapid anterior hippocampal volume increase associated with aerobic exercise. - Adam G. Thomas; Andrea Dennis; Nancy B. Rawlings; Charlotte J. Stagg; Lucy Matthews; Martyn Morris; Shannon H. Kolind; Sean Foxley; Mark Jenkinson; Thomas E. Nichols; Helen Dawes; Peter A. Bandettini; et al. (NeuroImage, 2016)

Time-Resolved Resting-State Functional Magnetic Resonance Imaging Analysis: Current Status, Challenges, and New Directions. - Shella D. Keilholz; César Caballero-Gaudes; Peter A. Bandettini; Gustavo Deco; Vince D. Calhoun (Brain Connect., 2017)

Variance decomposition for single-subject task-based fMRI activity estimates across many sessions. - Javier Gonzalez-Castillo; Gang Chen 008; Thomas E. Nichols; Peter A. Bandettini (NeuroImage, 2017)

Multi-echo fMRI: A review of applications in fMRI denoising and analysis of BOLD signals. - Prantik Kundu; Valerie Voon; Priti Balchandani; Michael V. Lombardo; Benedikt A. Poser; Peter A. Bandettini (NeuroImage, 2017)

A temporal deconvolution algorithm for multiecho functional MRI. - César Caballero-Gaudes; Peter A. Bandettini; Javier Gonzalez-Castillo (ISBI, 2018)

Quantitative Deconvolution of fMRI Data with Multi-echo Sparse Paradigm Free Mapping. - César Caballero-Gaudes; Stefano Moia; Peter A. Bandettini; Javier Gonzalez-Castillo (MICCAI (3), 2018)

Distributed Weight Consolidation: A Brain Segmentation Case Study. - Patrick McClure; Charles Y. Zheng; Jakub Kaczmarzyk; John Rogers-Lee; Satrajit S. Ghosh; Dylan Nielson; Peter A. Bandettini; Francisco Pereira 001 (NeurIPS, 2018)

Parallel Weight Consolidation: A Brain Segmentation Case Study. - Patrick McClure; Charles Y. Zheng; Francisco Pereira 001; Jakub Kaczmarzyk; John Rogers-Lee; Dylan Nielson; Peter A. Bandettini (CoRR, 2018)

Knowing what you know in brain segmentation using deep neural networks. - Patrick McClure; Nao Rho; John A. Lee; Jakub R. Kaczmarzyk; Charles Y. Zheng; Satrajit S. Ghosh; Dylan Nielson; Adam G. Thomas; Peter A. Bandettini; Francisco Pereira 001 (CoRR, 2018)

Task-based dynamic functional connectivity: Recent findings and open questions. - Javier Gonzalez-Castillo; Peter A. Bandettini (NeuroImage, 2018)

Techniques for blood volume fMRI with VASO: From low-resolution mapping towards sub-millimeter layer-dependent applications. - Laurentius Huber; Dimo Ivanov; Daniel A. Handwerker; Sean Marrett; Maria Guidi; Kâmil Uludag; Peter A. Bandettini; Benedikt A. Poser (NeuroImage, 2018)

Ultra-high resolution blood volume fMRI and BOLD fMRI in humans at 9.4 T: Capabilities and challenges. - Laurentius Huber; Desmond H. Y. Tse; Christopher J. Wiggins; Kâmil Uludag; Sriranga Kashyap; David C. Jangraw; Peter A. Bandettini; Benedikt A. Poser; Dimo Ivanov (NeuroImage, 2018)

A functional connectivity-based neuromarker of sustained attention generalizes to predict recall in a reading task. - David C. Jangraw; Javier Gonzalez-Castillo; Daniel A. Handwerker; Merage Ghane; Monica D. Rosenberg; Puja Panwar; Peter A. Bandettini (NeuroImage, 2018)

Statistical power comparisons at 3T and 7T with a GO / NOGO task. - Salvatore Torrisi; Gang Chen 008; Daniel R. Glen; Peter A. Bandettini; Chris I. Baker; Richard C. Reynolds; Jeffrey Yen-Ting Liu; Joseph Leshin; Nicholas L. Balderston; Christian Grillon; Monique Ernst (NeuroImage, 2018)

Whole-brain connectivity dynamics reflect both task-specific and individual-specific modulation: A multitask study. - Hua Xie; Vince D. Calhoun; Javier Gonzalez-Castillo; Eswar Damaraju; Robyn L. Miller; Peter A. Bandettini; Sunanda Mitra (NeuroImage, 2018)

Knowing What You Know in Brain Segmentation Using Bayesian Deep Neural Networks. - Patrick McClure; Nao Rho; John A. Lee; Jakub R. Kaczmarzyk; Charles Y. Zheng; Satrajit S. Ghosh; Dylan Nielson; Adam G. Thomas; Peter A. Bandettini; Francisco Pereira 001 (Frontiers Neuroinformatics, 2019)

A deconvolution algorithm for multi-echo functional MRI: Multi-echo Sparse Paradigm Free Mapping. - César Caballero-Gaudes; Stefano Moia; Puja Panwar; Peter A. Bandettini; Javier Gonzalez-Castillo (NeuroImage, 2019)

Visual temporal frequency preference shows a distinct cortical architecture using fMRI. - Yuhui Chai; Daniel A. Handwerker; Sean Marrett; Javier Gonzalez-Castillo; Elisha P. Merriam; Andrew Hall; Peter J. Molfese; Peter A. Bandettini (NeuroImage, 2019)

Apparent diffusion coefficient changes in human brain during sleep - Does it inform on the existence of a glymphatic system? - Sükrü Baris Demiral; Dardo Tomasi; Joelle E. Sarlls; Hedok Lee; Corinde E. Wiers; Amna Zehra; Tansha Srivastava; Kenneth Ke; Ehsan Shokri-Kojori; Clara R. Freeman; Elsa Lindgren; Veronica Ramirez; et al. (NeuroImage, 2019)

Imaging the spontaneous flow of thought: Distinct periods of cognition contribute to dynamic functional connectivity during rest. - Javier Gonzalez-Castillo; César Caballero-Gaudes; Natasha Topolski; Daniel A. Handwerker; Francisco Pereira 001; Peter A. Bandettini (NeuroImage, 2019)

Deep neural network predicts emotional responses of the human brain from functional magnetic resonance imaging. - Hyun-Chul Kim 002; Peter A. Bandettini; Jong-Hwan Lee (NeuroImage, 2019)

Efficacy of different dynamic functional connectivity methods to capture cognitively relevant information. - Hua Xie; Charles Y. Zheng; Daniel A. Handwerker; Peter A. Bandettini; Vince D. Calhoun; Sunanda Mitra; Javier Gonzalez-Castillo (NeuroImage, 2019)

Fast detection and reduction of local transient artifacts in resting-state fMRI. - Hang Joon Jo; Richard C. Reynolds; Stephen J. Gotts; Daniel A. Handwerker; Irena Balzekas; Alex Martin; Robert W. Cox; Peter A. Bandettini (Comput. Biol. Medicine, 2020)

Integrated VASO and perfusion contrast: A new tool for laminar functional MRI. - Yuhui Chai; Linqing Li; Laurentius Huber; Benedikt A. Poser; Peter A. Bandettini (NeuroImage, 2020)

Untangling the relatedness among correlations, part III: Inter-subject correlation analysis through Bayesian multilevel modeling for naturalistic scanning. - Gang Chen 008; Paul A. Taylor; Xianggui Qu; Peter J. Molfese; Peter A. Bandettini; Robert W. Cox; Emily S. Finn (NeuroImage, 2020)

Idiosynchrony: From shared responses to individual differences during naturalistic neuroimaging. - Emily S. Finn; Enrico Glerean; Arman Y. Khojandi; Dylan Nielson; Peter J. Molfese; Daniel A. Handwerker; Peter A. Bandettini (NeuroImage, 2020)

Sub-millimeter fMRI reveals multiple topographical digit representations that form action maps in human motor cortex. - Laurentius Huber; Emily S. Finn; Daniel A. Handwerker; Marlene Bönstrup; Daniel R. Glen; Sriranga Kashyap; Dimo Ivanov; Natalia Petridou; Sean Marrett; Jozien B. M. Goense; Benedikt A. Poser; Peter A. Bandettini (NeuroImage, 2020)

TE-dependent analysis of multi-echo fMRI with tedana. - Elizabeth Dupre; Taylor Salo; Zaki Ahmed; Peter A. Bandettini; Katherine L. Bottenhorn; César Caballero-Gaudes; Logan Dowdle; Javier Gonzalez-Castillo; Stephan Heunis; Prantik Kundu; Angela R. Laird; Ross D. Markello; et al. (J. Open Source Softw., 2021)

Magnetization transfer weighted EPI facilitates cortical depth determination in native fMRI space. - Yuhui Chai; Linqing Li; Yicun Wang; Laurentius Huber; Benedikt A. Poser; Jeff H. Duyn; Peter A. Bandettini (NeuroImage, 2021)

Movie-watching outperforms rest for functional connectivity-based prediction of behavior. - Emily S. Finn; Peter A. Bandettini (NeuroImage, 2021)

LayNii: A software suite for layer-fMRI. - Laurentius Huber; Benedikt A. Poser; Peter A. Bandettini; Kabir Arora; Konrad Wagstyl; Shinho Cho; Jozien B. M. Goense; Nils Nothnagel; Andrew Tyler Morgan; Job van den Hurk; Anna K. Müller; Richard C. Reynolds; et al. (NeuroImage, 2021)

Different activation signatures in the primary sensorimotor and higher-level regions for haptic three-dimensional curved surface exploration. - Jiajia Yang; Peter J. Molfese; Yinghua Yu; Daniel A. Handwerker; Gang Chen 008; Paul A. Taylor; Yoshimichi Ejima; Jinglong Wu; Peter A. Bandettini (NeuroImage, 2021)

Ultra-slow fMRI fluctuations in the fourth ventricle as a marker of drowsiness. - Javier Gonzalez-Castillo; Isabel S. Fernandez; Daniel A. Handwerker; Peter A. Bandettini (NeuroImage, 2022)

Layer-specific activation in human primary somatosensory cortex during tactile temporal prediction error processing. - Yinghua Yu; Laurentius Huber; Jiajia Yang; Masaki Fukunaga; Yuhui Chai; David C. Jangraw; Gang Chen 008; Daniel A. Handwerker; Peter J. Molfese; Yoshimichi Ejima; Norihiro Sadato; Jinglong Wu; et al. (NeuroImage, 2022)

Highlight results, don't hide them: Enhance interpretation, reduce biases and improve reproducibility. - Paul A. Taylor; Richard C. Reynolds; Vince D. Calhoun; Javier Gonzalez-Castillo; Daniel A. Handwerker; Peter A. Bandettini; Amanda F. Mejia; Gang Chen 008 (NeuroImage, 2023)

Inter-subject correlation during long narratives reveals widespread neural correlates of reading ability. - David C. Jangraw; Emily S. Finn; Peter A. Bandettini; Nicole Landi; Haorui Sun; Fumiko Hoeft; Gang Chen 008; Kenneth R. Pugh; Peter J. Molfese (NeuroImage, 2023)

Whole-brain multivariate hemodynamic deconvolution for functional MRI with stability selection. - Eneko Uruñuela; Javier Gonzalez-Castillo; Charles Zheng 001; Peter A. Bandettini; César Caballero-Gaudes (Medical Image Anal., 2024)