A software tool-box for analysis of regulatory RNA elements. - Peter Bengert; Thomas Dandekar (Nucleic Acids Res., 2003)

Riboswitch finder tool for identification of riboswitch RNAs. - Peter Bengert; Thomas Dandekar (Nucleic Acids Res., 2004)

Current efforts in the analysis of RNAi and RNAi target genes. - Peter Bengert; Thomas Dandekar (Briefings Bioinform., 2005)