Dyalog APL and the internet. - Peter Donnelly (ACM SIGAPL APL Quote Quad, 2002)

Writing IIS applications in dyalog APL. - Peter Donnelly (ACM SIGAPL APL Quote Quad, 2003)

HAPGEN2: simulation of multiple disease SNPs. - Zhan Su; Jonathan Marchini; Peter Donnelly (Bioinform., 2011)

Medical Device Software Traceability. - Fergal McCaffery; Valentine Casey; M. S. Sivakumar; Gerry Coleman; Peter Donnelly; John Burton (Software and Systems Traceability, 2012)

A robust clustering algorithm for identifying problematic samples in genome-wide association studies. - Céline Bellenguez; Amy Strange; Colin Freeman; Peter Donnelly; Chris C. A. Spencer (Bioinform., 2012)

Assessing association between protein truncating variants and quantitative traits. - Manuel A. Rivas; Matti Pirinen; Matthew J. Neville; Kyle J. Gaulton; Loukas Moutsianas; Cecilia M. Lindgren; Fredrik Karpe; Mark I. McCarthy; Peter Donnelly (Bioinform., 2013)

A Greedy Homotopy Method for Regression with Nonconvex Constraints. - Fabian L. Wauthier; Peter Donnelly (AISTATS, 2015)

Assessing allele-specific expression across multiple tissues from RNA-seq read data. - Matti Pirinen; Tuuli Lappalainen; Noah A. Zaitlen; Emmanouil T. Dermitzakis; Peter Donnelly; Mark I. McCarthy; Manuel A. Rivas (Bioinform., 2015)

The drift of industrial control systems to pseudo security. - Peter Donnelly; Mabrouka Abuhmida; Christopher Tubb (Int. J. Crit. Infrastructure Prot., 2022)