LIMO: Latent Inceptionism for Targeted Molecule Generation. - Peter Eckmann; Kunyang Sun; Bo Zhao 028; Mudong Feng; Michael K. Gilson; Rose Yu (ICML, 2022)

PreprintMatch: a tool for preprint publication detection applied to analyze global inequities in scientific publishing. - Peter Eckmann; Anita E. Bandrowski (CoRR, 2022)

Target-Free Compound Activity Prediction via Few-Shot Learning. - Peter Eckmann; Jake Anderson; Michael K. Gilson; Rose Yu (CoRR, 2023)

The Antibody Registry: ten years of registering antibodies. - Anita E. Bandrowski; Mason Pairish; Peter Eckmann; Jeffrey S. Grethe; Maryann E. Martone (Nucleic Acids Res., 2023)

MFBind: a Multi-Fidelity Approach for Evaluating Drug Compounds in Practical Generative Modeling. - Peter Eckmann; Dongxia Wu; Germano Heinzelmann; Michael K. Gilson; Rose Yu (CoRR, 2024)

Technical report: Improving the properties of molecules generated by LIMO. - Vineet Thumuluri; Peter Eckmann; Michael K. Gilson; Rose Yu (CoRR, 2024)

MF-LAL: Drug Compound Generation Using Multi-Fidelity Latent Space Active Learning. - Peter Eckmann; Dongxia Wu; Germano Heinzelmann; Michael K. Gilson; Rose Yu (CoRR, 2024)

Ligand-Based Compound Activity Prediction via Few-Shot Learning. - Peter Eckmann; Jake Anderson; Rose Yu; Michael K. Gilson (J. Chem. Inf. Model., 2024)

Use as Directed? A Comparison of Software Tools Intended to Check Rigor and Transparency of Published Work. - Peter Eckmann; Adrian Barnett; Alexandra Bannach-Brown; Elisa Pilar Bascunan Atria; Guillaume Cabanac; Louise Delwen Owen Franzen; Malgorzata Anna Gazda; Kaitlyn Hair; James Howison; Halil Kilicoglu; Cyril Labbé; Sarah McCann; et al. (CoRR, 2025)