Standardized high-throughput evaluation of cell-based compound screens. - Peter Frommolt; Roman K. Thomas (BMC Bioinform., 2008)

CoNCoS: Copy number estimation in cancer with controlled support. - Ali T. Abdallah; Matthias Fischer 003; Peter Nürnberg; Michael Nothnagel; Peter Frommolt (J. Bioinform. Comput. Biol., 2015)

Wormpath: searching for molecular interaction networks in Caenorhabditis elegans. - Peter Frommolt; Björn Schumacher (Source Code Biol. Medicine, 2015)

Integrative analysis and machine learning on cancer genomics data using the Cancer Systems Biology Database (CancerSysDB). - Rasmus Krempel; Pranav Kulkarni; Annie Yim; Ulrich Lang 002; Bianca Habermann; Peter Frommolt (BMC Bioinform., 2018)