A novel randomized iterative strategy for aligning multiple protein sequences. - M. P. Berger; Peter J. Munson (Comput. Appl. Biosci., 1991)

Protein Secondary Structure Prediction using Periodic-Quadratic-Logistic Models: Statistical and Theoretical Issue. - Peter J. Munson; Valentina Di Francesco; Raul Porrelli (HICSS (5), 1994)

Use of multiple alignments in protein secondary structure prediction. - Valentina Di Francesco; Peter J. Munson; Jean Garnier (HICSS (5), 1995)

Parallel Multiple Sequence Alignment Using Speculative Computation. - Tieng K. Yap; Peter J. Munson; Ophir Frieder; Robert L. Martino (ICPP (3), 1995)

Incorporating Global Information into Secondary Structure Prediction with Hidden Markov Models of Protein Folds. - Valentina Di Francesco; Philip McQueen; Jean Garnier; Peter J. Munson (ISMB, 1997)

Multi-Body Interactions within the Graph of Protein Structure. - Peter J. Munson; Raj K. Singh (ISMB, 1997)

FORESST: fold recognition from secondary structure predictions of proteins. - Valentina Di Francesco; Peter J. Munson; Jean Garnier (Bioinform., 1999)

ROC and confusion analysis of structure comparison methods identify the main causes of divergence from manual protein classification. - Vichetra Sam; Chin-Hsien Tai; Jean Garnier; Jean-François Gibrat; Byungkook Lee; Peter J. Munson (BMC Bioinform., 2006)

AffyProbeMiner: a web resource for computing or retrieving accurately redefined Affymetrix probe sets. - Hongfang Liu; Barry Zeeberg; Gang Qu 001; Akif Günes Koru; Alessandro Ferrucci; Ari B. Kahn; Michael C. Ryan; Antej Nuhanovic; Peter J. Munson; William C. Reinhold; David W. Kane; John N. Weinstein (Bioinform., 2007)

Towards an automatic classification of protein structural domains based on structural similarity. - Vichetra Sam; Chin-Hsien Tai; Jean Garnier; Jean-François Gibrat; Byungkook Lee; Peter J. Munson (BMC Bioinform., 2008)

DOMIRE: a web server for identifying structural domains and their neighbors in proteins. - Franck Samson; Richard Shrager; Chin-Hsien Tai; Vichetra Sam; Byungkook Lee; Peter J. Munson; Jean-François Gibrat; Jean Garnier (Bioinform., 2012)