HugeIndex: a database with visualization tools for high-density oligonucleotide array data from normal human tissues. - Peter M. Haverty; Zhiping Weng; Nathan L. Best; Kenneth R. Auerbach; Li-Li Hsiao; Roderick V. Jensen; Steven R. Gullans (Nucleic Acids Res., 2002)

Limited agreement among three global gene expression methods highlights the requirement for non-global validation. - Peter M. Haverty; Li-Li Hsiao; Steven R. Gullans; Ulla Hansen; Zhiping Weng (Bioinform., 2004)

CisML: an XML-based format for sequence motif detection software. - Peter M. Haverty; Zhiping Weng (Bioinform., 2004)

MotifViz: an analysis and visualization tool for motif discovery. - Yutao Fu; Martin C. Frith; Peter M. Haverty; Zhiping Weng (Nucleic Acids Res., 2004)

CARRIE web service: automated transcriptional regulatory network inference and interactive analysis. - Peter M. Haverty; Martin C. Frith; Zhiping Weng (Nucleic Acids Res., 2004)

Transcriptional Regulatory Networks Activated by PI3K and ERK Transduced Growth Signals in Human Glioblastoma Cells. - Peter M. Haverty; Zhiping Weng; Ulla Hansen (J. Comput. Sci. Technol., 2005)

Integrative Analysis of Two Cell Lines Derived from a Non-Small-Lung Cancer Patient - A Panomics Approach. - Oleg Mayba; Florian Gnad; Michael Peyton; Fan Zhang 090; Kimberly Walter; Pan Du 006; Melanie A. Huntley; Zhaoshi Jiang; Jinfeng Liu; Peter M. Haverty; Robert Gentleman; Ruiqiang Li; et al. (Pacific Symposium on Biocomputing, 2014)