Detailed simulation of cancer exome sequencing data reveals differences and common limitations of variant callers. - Ariane L. Hofmann; Jonas Behr; Jochen Singer; Jack Kuipers; Christian Beisel; Peter Schraml; Holger Moch; Niko Beerenwinkel (BMC Bioinform., 2017)

Statistical tests for intra-tumour clonal co-occurrence and exclusivity. - Jack Kuipers; Ariane L. Moore; Katharina Jahn 001; Peter Schraml; Feng Wang; Kiyomi Morita; P. Andrew Futreal; Koichi Takahashi; Christian Beisel; Holger Moch; Niko Beerenwinkel (PLoS Comput. Biol., 2021)