Grid Infrastructure Monitoring as Reliable Information Service. - Petr Holub; Martin Kuba; Ludek Matyska; Miroslav Ruda (European Across Grids Conference, 2004)

User-Empowered Programmable Network Support for Collaborative Environment. - Eva Hladká; Petr Holub; Jirí Denemark (ECUMN, 2004)

Distributed Encoding Environment based on Grids and IBP Infrastructure. - Petr Holub; Lukás Hejtmánek (TERENA Networking Conference, 2004)

Scalability and Robustness of Virtual Multicast for Synchronous Multimedia Distribution. - Petr Holub; Eva Hladká; Ludek Matyska (ICN (2), 2005)

Active Element Network with P2P Control Plane. - Michal Procházka; Petr Holub; Eva Hladká (IWSOS/EuroNGI, 2006)

High-definition multimedia for multiparty low-latency interactive communication. - Petr Holub; Ludek Matyska; Milos Liska; Lukás Hejtmánek; Jirí Denemark; Tomás Rebok; Andrei Hutanu; Ravi Paruchuri; Jan Radil; Eva Hladká (Future Gener. Comput. Syst., 2006)

Distributed and collaborative visualization of large data sets using high-speed networks. - Andrei Hutanu; Gabrielle Allen; Stephen David Beck; Petr Holub; Hartmut Kaiser; Archit Kulshrestha; Milos Liska; Jon MacLaren; Ludek Matyska; Ravi Paruchuri; Steffen Prohaska; Edward Seidel; et al. (Future Gener. Comput. Syst., 2006)

Transparent security for collaborative environments. - Eva Hladká; Daniel Kouril; Michal Procházka; Ludek Matyska; Petr Holub (CollaborateCom, 2007)

Uncompressed HD video for collaborative teaching - an experiment. - Andrei Hutanu; Ravi Paruchuri; Daniel Eiland; Milos Liska; Petr Holub; Steven R. Thorpe; Yufeng Xin (CollaborateCom, 2007)

Secure and Pervasive Collaborative Platform for Medical Applications. - Petr Holub; Eva Hladká; Michal Procházka; Milos Liska (HealthGrid, 2007)

VirtCloud: Virtualising Network for Grid Environments. - David Antos; Ludek Matyska; Petr Holub; Jirí Sitera (AINA, 2009)

GColl group-to-group videoconferencing system: design and first experiences. - Petr Slovák; Pavel Troubil; Petr Holub (CollaborateCom, 2009)

CoUniverse: Framework for Building Self-Organizing Collaborative Environments Using Extreme-Bandwidth Media Applications. - Milos Liska; Petr Holub (ICN, 2009)

jSon: Network of Active Elements with Peer-to-Peer Control Plane. - Michal Procházka; Petr Holub; Eva Hladká (ICN, 2009)

GColl: A Flexible Videoconferencing Environment for Group-to-Group Interaction. - Petr Slovák; Pavel Troubil; Petr Holub (INTERACT (2), 2009)

GColl: enhancing trust in flexible group-to-group videoconferencing. - Petr Slovák; Pavel Troubil; Petr Holub (CHI Extended Abstracts, 2010)

GPU-Based Sample-Parallel Context Modeling for EBCOT in JPEG2000. - Jiri Matela; Vít Rusnák; Petr Holub (MEMICS, 2010)

Design and implementation of a production dynamically configurable testbed. - Kenny Welshons; Patrick Dorn; Andrei Hutanu; Petr Holub; John Vollbrecht; Gabrielle Allen (TG, 2010)

Exploring trust in group-to-group video-conferencing. - Petr Slovák; Peter Novák 002; Pavel Troubil; Petr Holub; Erik C. Hofer (CHI Extended Abstracts, 2011)

Efficient JPEG2000 EBCOT Context Modeling for Massively Parallel Architectures. - Jiri Matela; Vít Rusnák; Petr Holub (DCC, 2011)

Low GPU Occupancy Approach to Fast Arithmetic Coding in JPEG2000. - Jiri Matela; Martin Srom; Petr Holub (MEMICS, 2011)

Data transfer planning with tree placement for collaborative environments. - Petr Holub; Hana Rudová; Milos Liska (Constraints An Int. J., 2011)

Exploring Collaboration in Group-to-Group Videoconferencing. - Petr Slovák; Peter Novák 002; Pavel Troubil; Vít Rusnák; Petr Holub; Erik C. Hofer (COOP, 2012)

Towards User-Aware Multi-touch Interaction Layer for Group Collaborative Systems. - Vít Rusnák; Lukás Rucka; Petr Holub (MEMICS, 2012)

UltraGrid: low-latency high-quality video transmissions on commodity hardware. - Petr Holub; Jiri Matela; Martin Pulec; Martin Srom (ACM Multimedia, 2012)

Local Search Heuristics for Media Streams Planning Problem. - Jiri Marek; Petr Holub; Hana Rudová (AINA, 2013)

Media Streams Planning with Transcoding. - Pavel Troubil; Hana Rudová; Petr Holub (NCA, 2013)

GPU-accelerated DXT and JPEG compression schemes for low-latency network transmissions of HD, 2K, and 4K video. - Petr Holub; Martin Srom; Martin Pulec; Jiri Matela; Martin Jirman (Future Gener. Comput. Syst., 2013)

Local Search Heuristics for Media Streams Planning with Transcoding. - Jiri Marek; Hana Rudová; Petr Holub (NCA, 2014)

Media Streams Planning with Uncertain Link Capacities. - Pavel Troubil; Hana Rudová; Petr Holub (NCA, 2014)

High-performance forward error correction: Enabling multi-gigabit flows and beyond on commodity GPU and CPU hardware in presence of packet loss. - Milan Kabát; Vojtech David; Petr Holub; Martin Pulec (Future Gener. Comput. Syst., 2016)

Toward natural multi-user interaction in advanced collaborative display environments. - Vít Rusnák; Lukás Rucka; Petr Holub (Future Gener. Comput. Syst., 2016)

A Decentralized IT Architecture for Locating and Negotiating Access to Biobank Samples. - Rumyana Proynova; Diogo Alexandre; Martin Lablans; David van Enckevort; Sebastian Mate; Niina Eklund; Kaisa Silander; Michael Hummel; Petr Holub; Frank Ückert (GMDS, 2017)

BiobankUniverse: automatic matchmaking between datasets for biobank data discovery and integration. - Chao Pang; Fleur D. L. Kelpin; David van Enckevort; Niina Eklund; Kaisa Silander; Dennis Hendriksen; Mark de Haan; Jonathan Jetten; Tommy de Boer; Bart Charbon; Petr Holub; Hans L. Hillege; et al. (Bioinform., 2017)

Four simple recommendations to encourage best practices in research software. - Rafael C. Jiménez; Mateusz Kuzak; Monther Alhamdoosh; Michelle Barker; Bérénice Batut; Mikael Borg; Salvador Capella-Gutiérrez; Neil P. Chue Hong; Martin Cook; Manuel Corpas; Madison Flannery; Leyla J. García; et al. (F1000Research, 2017)

Dynamic reconfiguration in multigroup multicast routing under uncertainty. - Pavel Troubil; Hana Rudová; Petr Holub (J. Heuristics, 2018)

Towards a reconstructive methodology for building a provenance metamodel that fits the complex bioinformatics pipelines. - Isabelle Perseil; Petr Holub (RO, 2019)

Pan-European Data Harmonization for Biobanks in ADOPT BBMRI-ERIC. - Sebastian Mate; Marvin O. Kampf; Wolfgang Rödle; Stefan Kraus; Rumyana Proynova; Kaisa Silander; Lars Ebert; Martin Lablans; Christina Schüttler; Christian Knell; Niina Eklund; Michael Hummel; et al. (Appl. Clin. Inform., 2019)

State of FAIRness in ESFRI Projects. - Peter Wittenburg; Franciska de Jong; Dieter Van Uytvanck; Massimo Cocco; Keith G. Jeffery; Michael Lautenschlager; Hannes Thiemann; Margareta Hellström; Ari Asmi; Petr Holub (Data Intell., 2020)

Non-repudiable Provenance for Clinical Decision Support Systems. - Elliot Fairweather; Rudolf Wittner; Martin Chapman; Petr Holub; Vasa Curcin (IPAW, 2021)

ISO 23494: Biotechnology - Provenance Information Model for Biological Specimen And Data. - Rudolf Wittner; Petr Holub; Heimo Müller; Jörg Geiger; Carole A. Goble; Stian Soiland-Reyes; Luca Pireddu; Francesca Frexia; Cecilia Mascia; Elliot Fairweather; Jason R. Swedlow; Josh Moore; et al. (IPAW, 2021)

Integration of Biobanks in National eHealth Ecosystems Facilitating Long-Term Longitudinal Clinical-Omics Studies and Citizens' Engagement in Research Through eHealthBioR. - Athos Antoniades; Maria Papaioannou; Apostolos Malatras; Gregory Papagregoriou; Heimo Müller; Petr Holub; Constantinos Deltas; Christos N. Schizas (Frontiers Digit. Health, 2021)

The Common Provenance Model: Capturing Distributed Provenance in Life Sciences Processes. - Francesca Frexia; Cecilia Mascia; Rudolf Wittner; Markus Plass; Heimo Müller; Jörg Geiger; Petr Holub (MIE, 2022)

EOSC-LIFE WP4 TOOLBOX: Toolbox for sharing of sensitive data - a concept description. - Jan-Willem Boiten; Christian Ohmann; Ayodeji Adeniran; Steve Canham; Mónica Cano Abadia; Gauthier Chassang; Maria Luisa Chiusano; Romain David 001; Maddalena Fratelli; Philip Gribbon; Petr Holub; Rebecca Ludwig; et al. (CoRR, 2022)

Proposal for a framework of contextual metadata in selected research infrastructures of the life sciences and the social sciences & humanities. - Christian Ohmann; Maria Panagiotopoulou; Steve Canham; Petr Holub; Kurt Majcen; Gary Saunders; Maddalena Fratelli; Jing Tang 002; Philip Gribbon; Reagon Karki; Mari Kleemola; Katja Moilanen; et al. (Int. J. Metadata Semant. Ontologies, 2023)

Umbrella Data Management Plans to Integrate FAIR Data: Lessons From the ISIDORe and BY-COVID Consortia for Pandemic Preparedness. - Romain David 001; Audrey S. Richard; Claire Connellan; Katharina B. Lauer; Maria Luisa Chiusano; Carole A. Goble; Martin Houde; Isabel Kemmer; Antje Keppler; Philippe Lieutaud; Christian Ohmann; Maria Panagiotopoulou; et al. (Data Sci. J., 2023)

xOpat: eXplainable Open Pathology Analysis Tool. - Jirí Horák; Katarína Furmanová; Barbora Kozlíková; Tomás Brázdil; Petr Holub; M. Kacenga; Matej Gallo; R. Nenutil; Jan Byska; Vít Rusnák (Comput. Graph. Forum, 2023)

Sharing sensitive data in life sciences: an overview of centralized and federated approaches. - Maria Alexandra Rujano; Jan-Willem Boiten; Christian Ohmann; Steve Canham; Sergio Contrino; Romain David 001; Jonathan Ewbank; Claudia Filippone; Claire Connellan; Ilse Custers; Rick van Nuland; Michaela Theresia Mayrhofer; et al. (Briefings Bioinform., 2024)