Bayesian Hierarchical Model for Estimating Gene Expression Intensity Using Multiple Scanned Microarrays. - Rashi Gupta; Elja Arjas; Sangita Kulathinal; Andrew Thomas; Petri Auvinen (EURASIP J. Bioinform. Syst. Biol., 2008)

A Naive Bayes Classifier for Protein Function Prediction. - Jukka Kohonen; Sarish Talikota; Jukka Corander; Petri Auvinen; Elja Arjas (Silico Biol., 2009)

Bayesian integrated modeling of expression data: a case study on RhoG. - Rashi Gupta; Dario Greco; Petri Auvinen; Elja Arjas (BMC Bioinform., 2010)

Lep-MAP: fast and accurate linkage map construction for large SNP datasets. - Pasi Rastas; Lars Paulin; Ilkka Hanski; Rainer Lehtonen; Petri Auvinen (Bioinform., 2013)

Transcriptome dynamics-based operon prediction in prokaryotes. - Vittorio Fortino; Olli-Pekka Smolander; Petri Auvinen; Roberto Tagliaferri; Dario Greco (BMC Bioinform., 2014)

Inconsistent Denoising and Clustering Algorithms for Amplicon Sequence Data. - Kaisa Koskinen; Petri Auvinen; K. Johanna Björkroth; Jenni Hultman (J. Comput. Biol., 2015)

BARCOSEL: a tool for selecting an optimal barcode set for high-throughput sequencing. - Panu Somervuo; Patrik Koskinen; Peng Mei; Liisa Holm; Petri Auvinen; Lars Paulin (BMC Bioinform., 2018)