Tuning Approximate Boyer-Moore for Gene Sequences. - Petri Kalsi; Leena Salmela; Jorma Tarhio (SPIRE, 2007)

Comparison of Exact String Matching Algorithms for Biological Sequences. - Petri Kalsi; Hannu Peltola; Jorma Tarhio (BIRD, 2008)

mpscan: Fast Localisation of Multiple Reads in Genomes. - Eric Rivals; Leena Salmela; Petteri Kiiskinen; Petri Kalsi; Jorma Tarhio (WABI, 2009)

Approximate Boyer-Moore String Matching for Small Alphabets. - Leena Salmela; Jorma Tarhio; Petri Kalsi (Algorithmica, 2010)