cudaMap: a GPU accelerated program for gene expression connectivity mapping. - Darragh G. McArt; Peter Bankhead; Philip D. Dunne; Manuel Salto-Tellez; Peter Hamilton; Shu-Dong Zhang (BMC Bioinform., 2013)

QUADrATiC: scalable gene expression connectivity mapping for repurposing FDA-approved therapeutics. - Paul G. O'Reilly; Qing Wen; Peter Bankhead; Philip D. Dunne; Darragh G. McArt; Suzanne McPherson; Peter Hamilton; Ken I. Mills; Shu-Dong Zhang (BMC Bioinform., 2016)

Embracing an integromic approach to tissue biomarker research in cancer: Perspectives and lessons learned. - Gerald Li; Peter Bankhead; Philip D. Dunne; Paul G. O'Reilly; Jacqueline A. James; Manuel Salto-Tellez; Peter Hamilton; Darragh G. McArt (Briefings Bioinform., 2017)

FLINO: a new method for immunofluorescence bioimage normalization. - John F. Graf; Sanghee Cho; Elizabeth McDonough; Alex Corwin; Anup Sood; Andreas Lindner; Manuela Salvucci; Xanthi Stachtea; Sandra Van Schaeybroeck; Philip D. Dunne; Pierre Laurent-Puig; Daniel B. Longley; et al. (Bioinform., 2022)