The Genetic Coding Style of Digital Organisms. - Philip Gerlee; Torbjörn Lundh (ECAL, 2005)

The gene-function relationship in the metabolism of yeast and digital organisms. - Philip Gerlee; Torbjörn Lundh; Bing Zhang 003; Alexander R. A. Anderson (ALIFE, 2008)

The Emergence of Overlapping Scale-free Genetic Architecture in Digital Organisms. - Philip Gerlee; Torbjörn Lundh (Artif. Life, 2008)

Pathway identification by network pruning in the metabolic network of Escherichia coli. - Philip Gerlee; L. Lizana; Kim Sneppen (Bioinform., 2009)

Modelling evolutionary cell behaviour using neural networks: Application to tumour growth. - Philip Gerlee; Alexander R. A. Anderson (Biosyst., 2009)

Evolving Homeostatic Tissue Using Genetic Algorithms. - Philip Gerlee; David Basanta; Alexander R. A. Anderson (ALIFE, 2010)

Rock-Paper-Scissors Dynamics in a Digital Ecology. - Philip Gerlee; Torbjörn Lundh (ALIFE, 2010)

Weak Emergence and Complexity. - Henrik Thorén; Philip Gerlee (ALIFE, 2010)

Urdar - an artificial ecology platform. - Philip Gerlee; Torbjörn Lundh (ECAL, 2011)

The Impact of Phenotypic Switching on Glioblastoma Growth and Invasion. - Philip Gerlee; Sven Nelander (PLoS Comput. Biol., 2012)

The Influence of Cellular Characteristics on the Evolution of Shape Homeostasis. - Philip Gerlee; David Basanta; Alexander R. A. Anderson (Artif. Life, 2017)

Inferring rates of metastatic dissemination using stochastic network models. - Philip Gerlee; Mia Johansson (PLoS Comput. Biol., 2019)

Time scales and wave formation in non-linear spatial public goods games. - Gregory J. Kimmel; Philip Gerlee; Philipp M. Altrock (PLoS Comput. Biol., 2019)

Ladderpath Approach: How Tinkering and Reuse Increase Complexity and Information. - Yu Liu 064; Zengru Di; Philip Gerlee (Entropy, 2022)

Autocrine signaling can explain the emergence of Allee effects in cancer cell populations. - Philip Gerlee; Philipp M. Altrock; Adam Malik; Cecilia Krona; Sven Nelander (PLoS Comput. Biol., 2022)