A computationally efficient discrete Backus-Gilbert footprint-matching algorithm. - Philip J. Stephens; Andrew S. Jones (IEEE Trans. Geosci. Remote. Sens., 2002)

Bounds on the Variance in the Pattern Matching Criteria. - Philip J. Stephens; Andrew S. Jones (IEEE Trans. Geosci. Remote. Sens., 2006)

Geometrical Variations of Gain Patterns. - Philip J. Stephens; Andrew S. Jones (IEEE Trans. Geosci. Remote. Sens., 2007)

A computational approach to distinguish somatic vs. germline origin of genomic alterations from deep sequencing of cancer specimens without a matched normal. - James X. Sun; Yuting He; Eric Sanford; Meagan Montesion; Garrett M. Frampton; Stéphane Vignot; Jean-Charles Soria; Jeffrey S. Ross; Vincent A. Miller; Philip J. Stephens; Doron Lipson; Roman Yelensky (PLoS Comput. Biol., 2018)