Promoter Prediction Using Physico-Chemical Properties of DNA. - Philip J. Uren; R. Mike Cameron-Jones; Arthur H. J. Sale (CompLife, 2006)

MAUSA: Using Simulated Annealing for Guide Tree Construction in Multiple Sequence Alignment. - Philip J. Uren; R. Mike Cameron-Jones; Arthur H. J. Sale (Australian Conference on Artificial Intelligence, 2007)

Improving Promoter Prediction Using Multiple Instance Learning. - Philip J. Uren; R. Mike Cameron-Jones; Arthur H. J. Sale (Australasian Conference on Artificial Intelligence, 2008)

Site identification in high-throughput RNA-protein interaction data. - Philip J. Uren; Emad Bahrami Samani; Suzanne C. Burns; Mei Qiao; Fedor V. Karginov; Emily Hodges; Gregory J. Hannon; Jeremy R. Sanford; Luiz O. F. Penalva; Andrew D. Smith (Bioinform., 2012)

Riborex: fast and flexible identification of differential translation from Ribo-seq data. - Wenzheng Li; Weili Wang; Philip J. Uren; Luiz O. F. Penalva; Andrew D. Smith (Bioinform., 2017)