LocTree3 prediction of localization. - Tatyana Goldberg; Maximilian Hecht; Tobias Hamp; Timothy Karl; Guy Yachdav; Nadeem Ahmed; Uwe Altermann; Philipp Angerer; Sonja Ansorge; Kinga Balasz; Michael Bernhofer; Alexander Betz; et al. (Nucleic Acids Res., 2014)

destiny: diffusion maps for large-scale single-cell data in R. - Philipp Angerer; Laleh Haghverdi; Maren Büttner; Fabian J. Theis; Carsten Marr; Florian A. Büttner (Bioinform., 2016)

Automatic identification of relevant genes from low-dimensional embeddings of single-cell RNA-seq data. - Philipp Angerer; David S. Fischer; Fabian J. Theis; Antonio Scialdone; Carsten Marr (Bioinform., 2020)

anndata: Access and store annotated data matrices. - Isaac Virshup; Sergei Rybakov; Fabian J. Theis; Philipp Angerer; F. Alexander Wolf (J. Open Source Softw., 2024)