Differential analysis for high density tiling microarray data. - Srinka Ghosh; Heather A. Hirsch; Edward A. Sekinger; Philipp Kapranov; Kevin Struhl; Thomas R. Gingeras (BMC Bioinform., 2007)

Error Tolerant Indexing and Alignment of Short Reads with Covering Template Families. - Eldar Giladi; John Healy; Gene Myers; Chris Hart; Philipp Kapranov; Doron Lipson; Steve Roels; Edward C. Thayer; Stan Letovsky (J. Comput. Biol., 2010)

Evaluating Performance of Different RNA Secondary Structure Prediction Programs Using Self-cleaving Ribozymes. - Fei Qi 006; Junjie Chen; Yue Chen; Jianfeng Sun; Yiting Lin; Zipeng Chen; Philipp Kapranov (Genom. Proteom. Bioinform., 2024)