Generator estimation of Markov jump processes. - Philipp Metzner; Evelyn Dittmer; Tobias Jahnke; Christof Schütte (J. Comput. Phys., 2007)

Transition Path Theory for Markov Jump Processes. - Philipp Metzner; Christof Schütte; Eric Vanden-Eijnden (Multiscale Model. Simul., 2008)

Macroscopic Dynamics of Complex Metastable Systems: Theory, Algorithms, and Application to B-DNA. - Illia Horenko; Evelyn Dittmer; Filip Lankas; John Maddocks; Philipp Metzner; Christof Schütte (SIAM J. Appl. Dyn. Syst., 2008)

HIV-1 Polymerase Inhibition by Nucleoside Analogs: Cellular- and Kinetic Parameters of Efficacy, Susceptibility and Resistance Selection. - Max von Kleist; Philipp Metzner; Roland Marquet; Christof Schütte (PLoS Comput. Biol., 2012)