Alignment Statistics for Long-Range Correlated Genomic Sequences. - Philipp W. Messer; Ralf Bundschuh; Martin Vingron; Peter F. Arndt (RECOMB, 2006)

CorGen - measuring and generating long-range correlations for DNA sequence analysis. - Philipp W. Messer; Peter F. Arndt (Nucleic Acids Res., 2006)

Effects of Long-Range Correlations in DNA on Sequence Alignment Score Statistics. - Philipp W. Messer; Ralf Bundschuh; Martin Vingron; Peter F. Arndt (J. Comput. Biol., 2007)

Modeling CRISPR gene drives for suppression of invasive rodents using a supervised machine learning framework. - Samuel E. Champer; Nathan Oakes; Ronin Sharma; Pablo García-Díaz; Jackson Champer; Philipp W. Messer (PLoS Comput. Biol., 2021)