Unsupervised image segmentation using a distributed genetic algorithm. - Philippe Andrey; Philippe Tarroux (Pattern Recognit., 1994)

Unsupervised Texture Segmentation using Selectionist Relaxation. - Philippe Andrey; Philippe Tarroux (ECCV (1), 1996)

Unsupervised Segmentation of Markov Random Field Modeled Textured Images Using Selectionist Relaxation. - Philippe Andrey; Philippe Tarroux (IEEE Trans. Pattern Anal. Mach. Intell., 1998)

Selectionist relaxation: genetic algorithms applied to image segmentation. - Philippe Andrey (Image Vis. Comput., 1999)

Joint registration and averaging of multiple 3D anatomical surface models. - Emeric Maschino; Yves Maurin; Philippe Andrey (Comput. Vis. Image Underst., 2006)

Spatial normalisation of three-dimensional neuroanatomical models using shape registration, averaging, and warping. - Philippe Andrey; Emeric Maschino; Yves Maurin (ISBI, 2008)

A new filter for spot extraction in n-dimensional biological imaging. - Eric Biot; Elizabeth Crowell; Herman Hofte; Yves Maurin; Samantha Vernhettes; Philippe Andrey (ISBI, 2008)

Statistical Analysis of 3D Images Detects Regular Spatial Distributions of Centromeres and Chromocenters in Animal and Plant Nuclei. - Philippe Andrey; Kiên Kiêu; Clémence Kress; Gaëtan Lehmann; Leïla Tirichine; Zichuan Liu; Eric Biot; Pierre-Gaël Adenot; Cathy Hue-Beauvais; Nicole Houba-Hérin; Véronique Duranthon; Eve Devinoy; et al. (PLoS Comput. Biol., 2010)

Reconstructing the three-dimensional surface of a branching and merging biological structure from a stack of coplanar contours. - Jasmine Burguet; Philippe Mailly; Yves Maurin; Philippe Andrey (ISBI, 2011)

A method for modeling and visualizing the three-dimensional organization of neuron populations from replicated data: Properties, implementation and illustration. - Jasmine Burguet; Yves Maurin; Philippe Andrey (Pattern Recognit. Lett., 2011)

Statistical groupwise comparison of spatial point patterns in biological imaging. - Jasmine Burguet; Philippe Mailly; Philippe Andrey (ISBI, 2013)

A generic classification-based method for segmentation of nuclei in 3D images of early embryos. - Jaza Gul-Mohammed; Ignacio Arganda-Carreras; Philippe Andrey; Vincent Galy; Thomas Boudier (BMC Bioinform., 2014)

NucleusJ: an ImageJ plugin for quantifying 3D images of interphase nuclei. - Axel Poulet; Ignacio Arganda-Carreras; David Legland; Aline V. Probst; Philippe Andrey; Christophe Tatout (Bioinform., 2015)

MorphoLibJ: integrated library and plugins for mathematical morphology with ImageJ. - David Legland; Ignacio Arganda-Carreras; Philippe Andrey (Bioinform., 2016)

Towards a Spatio-Temporal Atlas of 3D Cellular Parameters During Leaf Morphogenesis. - Faïçal Selka; Thomas Blein; Jasmine Burguet; Eric Biot; Patrick Laufs; Philippe Andrey (ICCV Workshops, 2017)

A Statistically Representative Atlas for Mapping Neuronal Circuits in the Drosophila Adult Brain. - Ignacio Arganda-Carreras; Tudor Manoliu; Nicolas Mazuras; Florian Schulze; Juan Eugenio Iglesias; Katja Bühler; Arnim Jenett; François Rouyer; Philippe Andrey (Frontiers Neuroinformatics, 2018)

Surface Parameterization and Registration for Statistical Multiscale Atlasing of Organ Development. - Faïçal Selka; Jasmine Burguet; Eric Biot; Thomas Blein; Patrick Laufs; Philippe Andrey (CVPR Workshops, 2019)

Dynamic Atlasing Of Gene Expression Domains From Individual Images. - Mohamed Oughou; Eric Cunha; Eric Biot; Nicolas Arnaud; Patrick Laufs; Philippe Andrey; Jasmine Burguet (ISBI, 2019)

Cell geometry determines symmetric and asymmetric division plane selection in Arabidopsis early embryos. - Julien Moukhtar; Alain Trubuil; Katia Belcram; David Legland; Zhor Khadir; Aurélie Urbain; Jean-Christophe Palauqui; Philippe Andrey (PLoS Comput. Biol., 2019)

Deep learning of geometrical cell division rules. - Alexandre Durrmeyer; Jean-Christophe Palauqui; Philippe Andrey (CoRR, 2025)