Inferring ancestry in mouse genomes using a hidden Markov model. - Daniel Malmer; Phillip Andrew Richmond; Aaron Odell; Richard Radcliffe; Robin D. Dowell (BCB, 2014)

JASPAR 2020: update of the open-access database of transcription factor binding profiles. - Oriol Fornes; Jaime Abraham Castro-Mondragón; Aziz Khan 001; Robin van der Lee; Xi Zhang; Phillip Andrew Richmond; Bhavi P. Modi; Solenne Correard; Marius Gheorghe; Damir Baranasic; Walter Santana-Garcia; Ge Tan; et al. (Nucleic Acids Res., 2020)

Demonstrating the utility of flexible sequence queries against indexed short reads with FlexTyper. - Phillip Andrew Richmond; Alice Mary Kaye; Godfrain Jacques Kounkou; Tamar Vered Av-Shalom; Wyeth W. Wasserman (PLoS Comput. Biol., 2021)