Simultaneous prediction of transcription factor binding sites in a group of prokaryotic genomes. - Shaoqiang Zhang; Shan Li; Phuc T. Pham; Zhengchang Su (BMC Bioinform., 2010)

MotifClick: prediction of cis-regulatory binding sites via merging cliques. - Shaoqiang Zhang; Shan Li; Meng Niu; Phuc T. Pham; Zhengchang Su (BMC Bioinform., 2011)