3D imaging of surfaces and cells by numerical reconstruction of wavefronts in digital holography applied to transmission and reflection microscopy. - Tristan Colomb; Etienne Cuche; Pia Dahgren; Anca M. Marian; Frederic Montfort; Christian D. Depeursinge; Pierre Marquet; Pierre J. Magistretti (ISBI, 2002)

Sodium entry efficiency during action potentials: A novel single-parameter family of Hodgkin-Huxley models. - Anand Singh; Renaud Jolivet; Pierre J. Magistretti; Bruno Weber (NIPS, 2010)

Impact of Frequency on the Energetic Efficiency of Action Potentials. - Anand Singh; Pierre J. Magistretti; Bruno Weber; Renaud Jolivet (ICANN (1), 2012)

Multi-timescale Modeling of Activity-Dependent Metabolic Coupling in the Neuron-Glia-Vasculature Ensemble. - Renaud Jolivet; Jay S. Coggan; Igor Allaman; Pierre J. Magistretti (PLoS Comput. Biol., 2015)

Visual Analysis of Glycogen Derived Lactate Absorption in Dense and Sparse Surface Reconstructions of Rodent Brain Structures. - Corrado Calì; Marco Agus; Nicolas Gagnon; Markus Hadwiger; Pierre J. Magistretti (STAG, 2017)

Hyperquadrics for Shape Analysis of 3D Nanoscale Reconstructions of Brain Cell Nuclear Envelopes. - Marco Agus; Corrado Calì; A. Tapia Morales; Heikki Lehväslaiho; Pierre J. Magistretti; Enrico Gobbetti; Markus Hadwiger (STAG, 2018)

GLAM: Glycogen-derived Lactate Absorption Map for visual analysis of dense and sparse surface reconstructions of rodent brain structures on desktop systems and virtual environments. - Marco Agus; Daniya Boges; Nicolas Gagnon; Pierre J. Magistretti; Markus Hadwiger; Corrado Calì (Comput. Graph., 2018)

Abstractocyte: A Visual Tool for Exploring Nanoscale Astroglial Cells. - Haneen Mohammed; Ali K. Al-Awami; Johanna Beyer; Corrado Calì; Pierre J. Magistretti; Hanspeter Pfister; Markus Hadwiger (IEEE Trans. Vis. Comput. Graph., 2018)

Immersive Environment for Creating, Proofreading, and Exploring Skeletons of Nanometric Scale Neural Structures. - Daniya Boges; Corrado Calì; Pierre J. Magistretti; Markus Hadwiger; Ronell Sicat; Marco Agus (STAG, 2019)

Virtual environment for processing medial axis representations of 3D nanoscale reconstructions of brain cellular structures. - Daniya Boges; Corrado Calì; Pierre J. Magistretti; Markus Hadwiger; Ronell Sicat; Marco Agus (VRST, 2019)

Interactive Volumetric Visual Analysis of Glycogen-derived Energy Absorption in Nanometric Brain Structures. - Marco Agus; Corrado Calì; Ali K. Al-Awami; Enrico Gobbetti; Pierre J. Magistretti; Markus Hadwiger (Comput. Graph. Forum, 2019)

Shape analysis of 3D nanoscale reconstructions of brain cell nuclear envelopes by implicit and explicit parametric representations. - Marco Agus; Maria Veloz Castillo; Javier F. Garnica Molina; Enrico Gobbetti; Heikki Lehväslaiho; A. Tapia Morales; Pierre J. Magistretti; Markus Hadwiger; Corrado Calì (Comput. Graph. X, 2019)

Virtual reality framework for editing and exploring medial axis representations of nanometric scale neural structures . - Daniya Boges; Marco Agus; Ronell Sicat; Pierre J. Magistretti; Markus Hadwiger; Corrado Calì (Comput. Graph., 2020)

InShaDe: Invariant Shape Descriptors for visual 2D and 3D cellular and nuclear shape analysis and classification. - Khaled A. Al-Thelaya; Marco Agus; Nauman Ullah Gilal; Yin Yang 001; Giovanni Pintore; Enrico Gobbetti; Corrado Calì; Pierre J. Magistretti; William Mifsud; Jens Schneider 002 (Comput. Graph., 2021)

Roadmap on Digital Holography-Based Quantitative Phase Imaging. - Vinoth Balasubramani; Malgorzata Kujawinska; Cédric Allier; Vijayakumar Anand; Chau-Jern Cheng; Christian D. Depeursinge; Nathaniel Hai; Saulius Juodkazis; Jeroen Kalkman; Arkadiusz Kus; Moosung Lee; Pierre J. Magistretti; et al. (J. Imaging, 2021)

Nonlinear Reconstruction of Images from Patterns Generated by Deterministic or Random Optical Masks - Concepts and Review of Research. - Daniel Smith; Shivasubramanian Gopinath; Francis Gracy Arockiaraj; Andra Naresh Kumar Reddy; Vinoth Balasubramani; Ravi Kumar 009; Nitin Dubey; Soon Hock Ng; Tomas Katkus; Shakina Jothi Selva; Dhanalakshmi Renganathan; Manueldoss Beaula Ruby Kamalam; et al. (J. Imaging, 2022)

Ultraliser: a framework for creating multiscale, high-fidelity and geometrically realistic 3D models for in silico neuroscience. - Marwan Abdellah; Juan Jose Garcia-Cantero; Nadir Román Guerrero; Alessandro Foni; Jay S. Coggan; Corrado Calì; Marco Agus; Eleftherios Zisis; Daniel X. Keller; Markus Hadwiger; Pierre J. Magistretti; Henry Markram; et al. (Briefings Bioinform., 2023)

SAM4EM: Efficient memory-based two stage prompt-free segment anything model adapter for complex 3D neuroscience electron microscopy stacks. - Uzair Shah; Marco Agus; Daniya Boges; Vanessa Chiappini; Mahmood Alzubaidi; Jens Schneider 002; Markus Hadwiger; Pierre J. Magistretti; Mowafa S. Househ; Corrado Calì (CVPR Workshops, 2025)

AI-guided immersive exploration of brain ultrastructure for collaborative analysis and education. - Uzair Shah; Marco Agus; Daniya Boges; Hamad Aldous; Vanessa Chiappini; Mahmood Alzubaidi; Markus Hadwiger; Pierre J. Magistretti; Mowafa Said Househ; Corrado Calì (Comput. Graph., 2025)