Extensions of marginalized graph kernels. - Pierre Mahé; Nobuhisa Ueda; Tatsuya Akutsu; Jean-Luc Perret; Jean-Philippe Vert (ICML, 2004)

Graph Kernels for Molecular Structure-Activity Relationship Analysis with Support Vector Machines. - Pierre Mahé; Nobuhisa Ueda; Tatsuya Akutsu; Jean-Luc Perret; Jean-Philippe Vert (J. Chem. Inf. Model., 2005)

The Pharmacophore Kernel for Virtual Screening with Support Vector Machines. - Pierre Mahé; Liva Ralaivola; Véronique Stoven; Jean-Philippe Vert (J. Chem. Inf. Model., 2006)

Virtual screening with support vector machines and structure kernels - Pierre Mahé; Jean-Philippe Vert (CoRR, 2007)

Factored sequence kernels. - Nicola Cancedda; Pierre Mahé (Neurocomputing, 2009)

Graph kernels based on tree patterns for molecules. - Pierre Mahé; Jean-Philippe Vert (Mach. Learn., 2009)

MicroMass. - Pierre Mahé; Jean-Baptiste Veyrieras (UCI Machine Learning Repository, 2013)

On Learning Matrices with Orthogonal Columns or Disjoint Supports. - Kevin Vervier; Pierre Mahé; Alexandre d'Aspremont; Jean-Baptiste Veyrieras; Jean-Philippe Vert (ECML/PKDD (3), 2014)

Classification of Proteomic MS Data as Bayesian Solution of an Inverse Problem. - Pascal Szacherski; Jean-François Giovannelli; Laurent Gerfault; Pierre Mahé; Jean-Philippe Charrier; Audrey Giremus; Bruno Lacroix; Pierre Grangeat (IEEE Access, 2014)

Automatic identification of mixed bacterial species fingerprints in a MALDI-TOF mass-spectrum. - Pierre Mahé; Maud Arsac; Sonia Chatellier; Valérie Monnin; Nadine Perrot; Sandrine Mailler; Victoria Girard; Mahendrasingh Ramjeet; Jérémy Surre; Bruno Lacroix; Alex van Belkum; Jean-Baptiste Veyrieras (Bioinform., 2014)

Benchmark of structured machine learning methods for microbial identification from mass-spectrometry data. - Kevin Vervier; Pierre Mahé; Jean-Baptiste Veyrieras; Jean-Philippe Vert (CoRR, 2015)

Large-scale machine learning for metagenomics sequence classification. - Kevin Vervier; Pierre Mahé; Maud Tournoud; Jean-Baptiste Veyrieras; Jean-Philippe Vert (Bioinform., 2016)

Variance component analysis to assess protein quantification in biomarker validation: application to selected reaction monitoring-mass spectrometry. - Amna Klich; Catherine Mercier; Laurent Gerfault; Pierre Grangeat; Corinne Beaulieu; Elodie Degout-Charmette; Tanguy Fortin; Pierre Mahé; Jean-François Giovannelli; Jean-Philippe Charrier; Audrey Giremus; Delphine Maucort-Boulch; et al. (BMC Bioinform., 2018)

Predicting bacterial resistance from whole-genome sequences using k-mers and stability selection. - Pierre Mahé; Maud Tournoud (BMC Bioinform., 2018)

Ambisonic Coding with Spatial Image Correction. - Pierre Mahé; Stéphane Ragot; Sylvain Marchand; Jérôme Daniel (EUSIPCO, 2020)

Codage Ambisonique pour les Communications Immersives. (Ambisonic Coding for Immersive Communications). - Pierre Mahé (2022)