Graph analysis of fragmented long-read bacterial genome assemblies. - Pierre Marijon; Rayan Chikhi; Jean-Stéphane Varré (Bioinform., 2019)

Novel components at the periphery of long read genome assembly tools. (Nouveaux composants à la périphérie des outils d'assemblages des génomes long read). - Pierre Marijon (2019)

A Graph-Theoretic Barcode Ordering Model for Linked-Reads. - Yoann Dufresne; Chen Sun 014; Pierre Marijon; Dominique Lavenier; Cédric Chauve; Rayan Chikhi (WABI, 2020)

yacrd and fpa: upstream tools for long-read genome assembly. - Pierre Marijon; Rayan Chikhi; Jean-Stéphane Varré (Bioinform., 2020)

The K-mer File Format: a standardized and compact disk representation of sets of k-mers. - Yoann Dufresne; Téo Lemane; Pierre Marijon; Pierre Peterlongo; Amatur Rahman; Marek Kokot; Paul Medvedev; Sebastian Deorowicz; Rayan Chikhi (Bioinform., 2022)

Back to sequences: Find the origin of k-mers. - Anthony Baire; Pierre Marijon; Francesco Andreace; Pierre Peterlongo (J. Open Source Softw., 2024)