Structure et dynamique de protéines isolées : approches statistiques. (Structure and dynamics of isolated proteins : statistical approaches). - Pierre Poulain (2006)

Insights on protein-DNA recognition by coarse grain modelling. - Pierre Poulain; Adrien Saladin; Brigitte Hartmann; Chantal Prévost (J. Comput. Chem., 2008)

Ten Simple Rules for Getting Help from Online Scientific Communities. - Giovanni Marco Dall'Olio; Jacopo Marino; Michael Schubert; Kevin L. Keys; Melanie I. Stefan; Colin S. Gillespie; Pierre Poulain; Khader Shameer; Robert Sugar; Brandon M. Invergo; Lars Juhl Jensen; Jaume Bertranpetit; et al. (PLoS Comput. Biol., 2011)

Meet-U: Educating through research immersion. - Nika Abdollahi; Alexandre Albani; Éric Anthony; Agnes Baud; Mélissa Cardon; Robert Clerc; Dariusz Czernecki; Romain Conte; Laurent David; Agathe Delaune; Samia Djerroud; Pauline Fourgoux; et al. (PLoS Comput. Biol., 2018)

AutoClassWrapper: a Python wrapper for AutoClass C classification. - Jean-Michel Camadro; Pierre Poulain (J. Open Source Softw., 2019)

buildH: Build hydrogen atoms from united-atom molecular dynamics of lipids and calculate the order parameters. - Hubert Santuz; Amélie Bacle; Pierre Poulain; Patrick Fuchs (J. Open Source Softw., 2021)

Recyclage des données de la recherche en biologie : vers une bioinformatique écologique? (Recycling biological research data: towards an ecological bioinformatics?). - Pierre Poulain (2022)

The five pillars of computational reproducibility: bioinformatics and beyond. - Mark Ziemann; Pierre Poulain; Anusuiya Bora (Briefings Bioinform., 2023)