Controlling the Deployment of Virtual Machines on Clusters and Clouds for Scientific Computing in CBRAIN. - Tristan Glatard; Marc-Etienne Rousseau; Pierre Rioux; Reza Adalat; Alan C. Evans (CCGRID, 2014)

CBRAIN: a web-based, distributed computing platform for collaborative neuroimaging research. - Tarek Sherif; Pierre Rioux; Marc-Etienne Rousseau; Nicolas Kassis; Natacha Beck; Reza Adalat; Samir Das; Tristan Glatard; Alan C. Evans (Frontiers Neuroinformatics, 2014)

Reproducibility of neuroimaging analyses across operating systems. - Tristan Glatard; Lindsay B. Lewis; Rafael Ferreira da Silva; Reza Adalat; Natacha Beck; Claude Lepage; Pierre Rioux; Marc-Etienne Rousseau; Tarek Sherif; Ewa Deelman; Najmeh Khalili-Mahani; Alan C. Evans (Frontiers Neuroinformatics, 2015)

Cyberinfrastructure for Open Science at the Montreal Neurological Institute. - Samir Das; Tristan Glatard; Christine Rogers; John Saigle; Santiago Paiva; Leigh C. MacIntyre; Mouna Safi-Harb; Marc-Etienne Rousseau; Jordan Stirling; Najmeh Khalili-Mahani; Dave MacFarlane; Penelope Kostopoulos; et al. (Frontiers Neuroinformatics, 2016)

The MNI data-sharing and processing ecosystem. - Samir Das; Tristan Glatard; Leigh C. MacIntyre; Cecile Madjar; Christine Rogers; Marc-Etienne Rousseau; Pierre Rioux; Dave MacFarlane; Zia Mohades; Rathi Gnanasekaran; Carolina Makowski; Penelope Kostopoulos; et al. (NeuroImage, 2016)

Boutiques: a flexible framework for automated application integration in computing platforms. - Tristan Glatard; Gregory Kiar; Tristan Aumentado-Armstrong; Natacha Beck; Pierre Bellec; Rémi Bernard; Axel Bonnet; Sorina Camarasu-Pop; Frédéric Cervenansky; Samir Das; Rafael Ferreira da Silva; Guillaume Flandin; et al. (CoRR, 2017)

Software architectures to integrate workflow engines in science gateways. - Tristan Glatard; Marc-Etienne Rousseau; Sorina Camarasu-Pop; Reza Adalat; Natacha Beck; Samir Das; Rafael Ferreira da Silva; Najmeh Khalili-Mahani; Vladimir Korkhov; Pierre-Olivier Quirion; Pierre Rioux; Sílvia D. Olabarriaga; et al. (Future Gener. Comput. Syst., 2017)

Integration of "omics" Data and Phenotypic Data Within a Unified Extensible Multimodal Framework. - Samir Das; Xavier Lecours-Boucher; Christine Rogers; Carolina Makowski; François Chouinard-Decorte; Kathleen Oros Klein; Natacha Beck; Pierre Rioux; Shawn T. Brown; Zia Mohaddes; Cole Zweber; Victoria Foing; et al. (Frontiers Neuroinformatics, 2018)

Comparing Perturbation Models for Evaluating Stability of Post-Processing Pipelines in Neuroimaging. - Gregory Kiar; Pablo de Oliveira Castro; Pierre Rioux; Eric Petit 002; Shawn T. Brown; Alan C. Evans; Tristan Glatard (CoRR, 2019)

Deploying large fixed file datasets with SquashFS and Singularity. - Pierre Rioux; Gregory Kiar; Alexandre Hutton; Alan C. Evans; Shawn T. Brown (PEARC, 2020)

Comparing perturbation models for evaluating stability of neuroimaging pipelines. - Gregory Kiar; Pablo de Oliveira Castro; Pierre Rioux; Eric Petit 002; Shawn T. Brown; Alan C. Evans; Tristan Glatard (Int. J. High Perform. Comput. Appl., 2020)

A Simulation Toolkit for Testing the Sensitivity and Accuracy of Corticometry Pipelines. - Mona Omidyeganeh; Najmeh Khalili-Mahani; Patrick Bermudez; Alison Ross; Claude Lepage; Robert D. Vincent; Seun Jeon; Lindsay B. Lewis; Samir Das; Alex P. Zijdenbos; Pierre Rioux; Reza Adalat; et al. (Frontiers Neuroinformatics, 2021)

Web-based processing of physiological noise in fMRI: addition of the PhysIO toolbox to CBRAIN. - Darius Valevicius; Natacha Beck; Lars Kasper; Sergiy Boroday; Johanna Bayer; Pierre Rioux; Bryan Caron; Reza Adalat; Alan C. Evans; Najmeh Khalili-Mahani (Frontiers Neuroinformatics, 2023)

bids-specification. - Aaron Oliver-Taylor; Adam Li; Adam G. Thomas; Adeen Flinker; Adina S. Wagner; Agah Karakuzu; Aki Nikolaidis; Alberto Lazari; Alejandro de la Vega; Alessio Giacomel; Alexander Rockhill; Alexander Jones; et al. (Zenodo, 2023)

The Brain Imaging Data Structure (BIDS) Specification. - Aaron Oliver-Taylor; Adam Li; Adam G. Thomas; Adeen Flinker; Adina S. Wagner; Agah Karakuzu; Aki Nikolaidis; Alberto Lazari; Alejandro de la Vega; Alessio Giacomel; Alexander Rockhill; Alexander Jones; et al. (Zenodo, 2024)