Simultaneous Enrichment Analysis of all Possible Gene-sets: Unifying Self-Contained and Competitive Methods. - Mitra Ebrahimpoor; Pietro Spitali; Kristina M. Hettne; Roula Tsonaka; Jelle J. Goeman (Briefings Bioinform., 2020)

The mRNA Binding Proteome of Proliferating and Differentiated Muscle Cells. - Monika Hiller; Miriam Geissler; George Janssen; Peter A. van Veelen; Annemieke Aartsma-Rus; Pietro Spitali (Genom. Proteom. Bioinform., 2020)

Negative Binomial mixed models estimated with the maximum likelihood method can be used for longitudinal RNAseq data. - Roula Tsonaka; Pietro Spitali (Briefings Bioinform., 2021)

FAIRification and semantic modelling for Duchenne and Becker Muscular Dystrophy rare diseases. - Pablo Perdomo-Quinteiro; Sergiu Siminiuc; Paraskevi Sakellariou; Marco Roos; Pietro Spitali; Núria Queralt-Rosinach (SWAT4HCLS, 2023)