SPECTR: Scalable Parallel Short Read Error Correction on Multi-core and Many-core Architectures. - Kai Xu; Robin Kobus; Yuandong Chan; Ping Gao 005; Xiangxu Meng; Yanjie Wei; Bertil Schmidt; Weiguo Liu (ICPP, 2018)

Redesigning LAMMPS for peta-scale and hundred-billion-atom simulation on Sunway TaihuLight. - Xiaohui Duan; Ping Gao 005; Tingjian Zhang; Meng Zhang; Weiguo Liu; Wusheng Zhang; Wei Xue 003; Haohuan Fu; Lin Gan; Dexun Chen; Xiangxu Meng; Guangwen Yang (SC, 2018)

SW_GROMACS: accelerate GROMACS on Sunway TaihuLight. - Tingjian Zhang; Yuxuan Li; Ping Gao 005; Qi Shao; Mingshan Shao; Meng Zhang; Jinxiao Zhang; Xiaohui Duan; Zhao Liu; Lin Gan; Haohuan Fu; Wei Xue 003; et al. (SC, 2019)

Neighbor-list-free molecular dynamics on sunway TaihuLight supercomputer. - Xiaohui Duan; Ping Gao 005; Meng Zhang; Tingjian Zhang; Hongsong Meng; Yuxuan Li; Bertil Schmidt; Haohuan Fu; Lin Gan; Wei Xue 003; Guangwen Yang; Weiguo Liu (PPoPP, 2020)

Cell-list based molecular dynamics on many-core processors: a case study on sunway TaihuLight supercomputer. - Xiaohui Duan; Ping Gao 005; Meng Zhang; Tingjian Zhang; Hongsong Meng; Yuxuan Li; Bertil Schmidt; Haohuan Fu; Lin Gan; Wei Xue 003; Weiguo Liu; Guangwen Yang (SC, 2020)

Millimeter-Scale and Billion-Atom Reactive Force Field Simulation on Sunway Taihulight. - Ping Gao 005; Xiaohui Duan; Tingjian Zhang; Meng Zhang; Bertil Schmidt; Xun Zhang; Hongliang Sun; Wusheng Zhang; Lin Gan; Wei Xue 003; Haohuan Fu; Weiguo Liu; et al. (IEEE Trans. Parallel Distributed Syst., 2020)

LMFF: efficient and scalable layered materials force field on heterogeneous many-core processors. - Ping Gao 005; Xiaohui Duan; Jiaxu Guo; Jin Wang; Zhenya Song; Lizhen Cui; Xiangxu Meng; Xin Liu 081; Wusheng Zhang; Ming Ma 012; Guohui Li; Dexun Chen; et al. (SC, 2021)

Optimization of Reactive Force Field Simulation: Refactor, Parallelization, and Vectorization for Interactions. - Ping Gao 005; Xiaohui Duan; Bertil Schmidt; Wusheng Zhang; Lin Gan; Haohuan Fu; Wei Xue 003; Weiguo Liu; Guangwen Yang (IEEE Trans. Parallel Distributed Syst., 2022)

Enabling Real World Scale Structural Superlubricity All-Atom Simulation on the Next-Generation Sunway Supercomputer. - Xiaohui Duan; Jin Wang; Ping Gao 005; Ming Ma 012; Lin Gan; Xin Liu 081; Haohuan Fu; Wei Xue 003; Dexun Chen; Guangwen Yang; Weiguo Liu (SC, 2023)

69.7-PFlops Extreme Scale Earthquake Simulation with Crossing Multi-faults and Topography on Sunway. - Wubing Wan; Lin Gan; Wenqiang Wang; Zekun Yin; Haodong Tian; Zhenguo Zhang; Yinuo Wang; Mengyuan Hua; Xiaohui Liu; Shengye Xiang; Zhongqiu He; Zijia Wang; et al. (SC, 2023)

Redesign and Accelerate the AIREBO Bond-Order Potential on the New Sunway Supercomputer. - Ping Gao 005; Xiaohui Duan; Bertil Schmidt; Wubing Wan; Jiaxu Guo; Wusheng Zhang; Lin Gan; Haohuan Fu; Wei Xue 003; Weiguo Liu; Guangwen Yang (IEEE Trans. Parallel Distributed Syst., 2023)

From Small to Large: A Graph Convolutional Network Approach for Solving Assortment Optimization Problems. - Guokai Li; Ping Gao 005; Stefanus Jasin; Zizhuo Wang (CoRR, 2025)

Accelerating Half-Precision Seismic Simulation on Neural Processing Unit. - Yinuo Wang; Zeyu Song; Wubing Wan; Xinpeng Zhao; Lin Gan; Ping Gao 005; Wenqiang Wang; Zhenguo Zhang; Haohuan Fu; Wei Xue 003; Guangwen Yang (IEEE Trans. Parallel Distributed Syst., 2025)