A Toxicity Evaluation and Predictive System Based on Neural Networks and Wavelets. - Pamela L. Piotrowski; Bobby G. Sumpter; Heinrich V. Malling; John S. Wassom; Pinyi Lu; Robin A. Brothers; Gary A. Sega; Sheryl A. Martin; Morey Parang (J. Chem. Inf. Model., 2007)

Systems Modeling of Molecular Mechanisms Controlling Cytokine-driven CD4+ T Cell Differentiation and Phenotype Plasticity. - Adria Carbo; Raquel Hontecillas; Barbara Kronsteiner; Monica Viladomiu; Mireia Pedragosa; Pinyi Lu; Casandra W. Philipson; Stefan Hoops; Madhav V. Marathe; Stephen G. Eubank; Keith R. Bisset; Katherine V. Wendelsdorf; et al. (PLoS Comput. Biol., 2013)

ENISI MSM: A novel multi-scale modeling platform for computational immunology. - Yongguo Mei; Adria Carbo; Raquel Hontecillas; Stefan Hoops; Nathan Liles; Pinyi Lu; Casandra W. Philipson; Josep Bassaganya-Riera (BIBM, 2014)

ENISI multiscale modeling of mucosal immune responses driven by high performance computing. - Vida Abedi; Raquel Hontecillas; Stefan Hoops; Nathan Liles; Adria Carbo; Pinyi Lu; Casandra W. Philipson; Josep Bassaganya-Riera (BIBM, 2015)

Supervised learning methods in modeling of CD4+ T cell heterogeneity. - Pinyi Lu; Vida Abedi; Yongguo Mei; Raquel Hontecillas; Stefan Hoops; Adria Carbo; Josep Bassaganya-Riera (BioData Min., 2015)

Multiscale modeling of mucosal immune responses. - Yongguo Mei; Vida Abedi; Adria Carbo; Xiaoying Zhang; Pinyi Lu; Casandra W. Philipson; Raquel Hontecillas; Stefan Hoops; Nathan Liles; Josep Bassaganya-Riera (BMC Bioinform., 2015)

SZGR 2.0: a one-stop shop of schizophrenia candidate genes. - Peilin Jia; Guangchun Han; Junfei Zhao; Pinyi Lu; Zhongming Zhao (Nucleic Acids Res., 2017)

mutLBSgeneDB: mutated ligand binding site gene DataBase. - Pora Kim; Junfei Zhao; Pinyi Lu; Zhongming Zhao (Nucleic Acids Res., 2017)

A cross-study analysis of drug response prediction in cancer cell lines. - Fangfang Xia; Jonathan E. Allen; Prasanna Balaprakash; Thomas S. Brettin; Cristina Garcia-Cardona; Austin Clyde; Judith D. Cohn; James H. Doroshow; Xiaotian Duan; Veronika Dubinkina; Yvonne A. Evrard; Ya Ju Fan; et al. (Briefings Bioinform., 2022)