Approximate reasoning on a DNA-chip. - Kumar Sankar Ray; Piyali Chatterjee (Int. J. Intell. Comput. Cybern., 2010)

Comparisons of Different Feature Sets for Predicting Carbohydrate-Binding Proteins From Amino Acid Sequences Using Support Vector Machine. - Suchandra Payal; Piyali Chatterjee; Subhadip Basu; Mahantapas Kundu; Mita Nasipuri (BIC-TA (1), 2012)

PDP-RF: Protein Domain Boundary Prediction Using Random Forest Classifier. - Piyali Chatterjee; Subhadip Basu; Julian Zubek; Mahantapas Kundu; Mita Nasipuri; Dariusz Plewczynski (PReMI, 2015)

Functional Group Prediction of Un-annotated Protein by Exploiting Its Neighborhood Analysis in Saccharomyces Cerevisiae Protein Interaction Network. - Sovan Saha; Piyali Chatterjee; Subhadip Basu; Mita Nasipuri (ACSS (2), 2016)

PLoc-Euk: An Ensemble Classifier for Prediction of Eukaryotic Protein Sub-cellular Localization. - Rajkamal Mitra; Piyali Chatterjee; Subhadip Basu; Mahantapas Kundu; Mita Nasipuri (FICTA (2), 2016)

Gene Ontology Based Function Prediction of Human Protein Using Protein Sequence and Neighborhood Property of PPI Network. - Sovan Saha; Piyali Chatterjee; Subhadip Basu; Mita Nasipuri (FICTA (2), 2016)

Protein Function Prediction from Protein Interaction Network Using Bottom-up L2L Apriori Algorithm. - Abhimanyu Prasad; Sovan Saha; Piyali Chatterjee; Subhadip Basu; Mita Nasipuri (CICBA (2), 2017)

Target Protein Function Prediction by Identification of Essential Proteins in Protein-Protein Interaction Network. - Soukhindra Nath Basak; Ankur Kumar Biswas; Sovan Saha; Piyali Chatterjee; Subhadip Basu; Mita Nasipuri (CICBA (2), 2018)

Protein function prediction from protein-protein interaction network using gene ontology based neighborhood analysis and physico-chemical features. - Sovan Saha; Abhimanyu Prasad; Piyali Chatterjee; Subhadip Basu; Mita Nasipuri (J. Bioinform. Comput. Biol., 2018)

Identification of Essential Proteins by Detecting Topological and Functional Clusters in Protein Interaction Network of Saccharomyces Cerevisiae. - Kaustav Sengupta; Sovan Saha; Piyali Chatterjee; Mahantapas Kundu; Mita Nasipuri; Subhadip Basu (Int. J. Nat. Comput. Res., 2019)

Protein function prediction from dynamic protein interaction network using gene expression data. - Sovan Saha; Abhimanyu Prasad; Piyali Chatterjee; Subhadip Basu; Mita Nasipuri (J. Bioinform. Comput. Biol., 2019)

3gClust: Human Protein Cluster Analysis. - Anup Kumar Halder; Piyali Chatterjee; Mita Nasipuri; Dariusz Plewczynski; Subhadip Basu (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

Computational modeling of Human-nCoV protein-protein interaction network. - Sovan Saha; Anup Kumar Halder; Soumyendu Sekhar Bandyopadhyay; Piyali Chatterjee; Mita Nasipuri; Subhadip Basu (CoRR, 2020)

Modified FPred-Apriori: improving function prediction of target proteins from essential neighbours by finding their association with relevant functional groups using Apriori algorithm. - Sovan Saha; Abhimanyu Prasad; Piyali Chatterjee; Subhadip Basu; Mita Nasipuri (Int. J. Adv. Intell. Paradigms, 2021)

The Pencil Code, a modular MPI code for partial differential equations and particles: multipurpose and multiuser-maintained. - The Pencil Code Collaboration; Axel Brandenburg; Anders Johansen; Philippe A. Bourdin; Wolfgang Dobler; Wladimir Lyra; Matthias Rheinhardt; Sven Bingert; Nils Erland L. Haugen; Antony Mee; Frederick Gent; Natalia Babkovskaia; et al. (J. Open Source Softw., 2021)

JUPPI: A Multi-Level Feature Based Method for PPI Prediction and a Refined Strategy for Performance Assessment. - Anup Kumar Halder; Soumyendu Sekhar Bandyopadhyay; Piyali Chatterjee; Mita Nasipuri; Dariusz Plewczynski; Subhadip Basu (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)