Algorithms for Designing the Minimal Set of Multiplexed Degenerate Universal Tagged Primers for RNA Virus Detection. - Jian Song; Jason D. Gans; Murray Wolinsky; Po-E Li; Emily Curd; Chris Detter; Hong Cai (BIOCOMP, 2008)

High-throughput Detection of Antibiotics Resistance in Threat Pathogens Using Multiplexed Oligonucleotide Ligation-PCR (MOL-PCR). - Po-E Li; P. Scott White; Jason D. Gans; Momchilo Vuyisich; Alina Deshpande; Murray Wolinsky; Jian Song (BIOCOMP, 2009)

ADEPT, a dynamic next generation sequencing data error-detection program with trimming. - Shihai Feng; Chien-Chi Lo; Po-E Li; Patrick S. G. Chain (BMC Bioinform., 2016)

Leveraging Ontologies within the National Microbiome Data Collaborative. - William D. Duncan; Faiza Ahmed; Fnu Anubhav; Jeffrey Baumes; Jonathan Beezley; Mark Borkum; Lisa M. Bramer; Shane Canon; Patrick S. G. Chain; Danielle Christianson; Yuri Corilo; Karen Davenport; et al. (ICBO, 2021)

A public website for the automated assessment and validation of SARS-CoV-2 diagnostic PCR assays. - Po-E Li; Adán Myers y Gutiérrez; Karen Davenport; Mark Flynn; Bin Hu 025; Chien-Chi Lo; Elais Player Jackson; Migun Shakya; Yan Xu; Jason D. Gans; Patrick S. G. Chain (Bioinform., 2021)

Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale. - Bin Hu 025; Shane Canon; Emiley A. Eloe-Fadrosh; Fnu Anubhav; Michal Babinski; Yuri Corilo; Karen Davenport; William D. Duncan; Kjiersten Fagnan; Mark Flynn; Brian Foster; David Hays; et al. (Frontiers Bioinform., 2021)

EDGE COVID-19: a web platform to generate submission-ready genomes from SARS-CoV-2 sequencing efforts. - Chien-Chi Lo; Migun Shakya; Ryan Connor; Karen Davenport; Mark Flynn; Adán Myers y Gutiérrez; Bin Hu 025; Po-E Li; Elais Player Jackson; Yan Xu; Patrick S. G. Chain (Bioinform., 2022)