Density parameter estimation for finding clusters of homologous proteins - tracing actinobacterial pathogenicity lifestyles. - Richard Röttger; Prabhav Kalaghatgi; Peng Sun 008; Siomar de Castro Soares; Vasco Ariston de Carvalho Azevedo; Tobias Wittkop; Jan Baumbach (Bioinform., 2013)

Selecting optimal minimum spanning trees that share a topological correspondence with phylogenetic trees. - Prabhav Kalaghatgi; Thomas Lengauer (CoRR, 2017)

Computing phylogenetic trees using topologically related minimum spanning trees. - Prabhav Kalaghatgi; Thomas Lengauer (J. Graph Algorithms Appl., 2017)

geno2pheno[ngs-freq]: a genotypic interpretation system for identifying viral drug resistance using next-generation sequencing data. - Matthias Döring; Joachim Büch; Georg Friedrich; Alejandro Pironti; Prabhav Kalaghatgi; Elena Knops; Eva Heger; Martin Obermeier; Martin Däumer; Alexander Thielen; Rolf Kaiser; Thomas Lengauer; et al. (Nucleic Acids Res., 2018)

Inferring phylogenetic trees under the general Markov model via a minimum spanning tree backbone. - Prabhav Kalaghatgi (2020)