A geometric invariant-based framework for the analysis of protein conformational space. - Ashish V. Tendulkar; Milind A. Sohoni; Babatunde Ogunnaike; Pramod P. Wangikar (Bioinform., 2005)

Gaussian Mixture Modeling of Helix Subclasses: Structure and Sequence Variations. - Ashish V. Tendulkar; Babatunde Ogunnaike; Pramod P. Wangikar (Pacific Symposium on Biocomputing, 2006)

GIPSCo: A Method for Comparison of Protein Structures Based on Geometric Invariants. - Sandeep Deshmukh; Aniket Dalal; Pramod P. Wangikar (BIOCOMP, 2008)

Dynamic Bayesian Network Modeling of Cyanobacterial Biological Processes via Gene Clustering. - Xuan Vinh Nguyen; Madhu Chetty; Ross L. Coppel; Pramod P. Wangikar (ICONIP (1), 2011)

Polynomial Time Algorithm for Learning Globally Optimal Dynamic Bayesian Network. - Xuan Vinh Nguyen; Madhu Chetty; Ross L. Coppel; Pramod P. Wangikar (ICONIP (3), 2011)

GlobalMIT: learning globally optimal dynamic bayesian network with the mutual information test criterion. - Xuan Vinh Nguyen; Madhu Chetty; Ross L. Coppel; Pramod P. Wangikar (Bioinform., 2011)

Characterization and sequence prediction of structural variations in α-helix. - Ashish V. Tendulkar; Pramod P. Wangikar (BMC Bioinform., 2011)

Local and Global Algorithms for Learning Dynamic Bayesian Networks. - Xuan Vinh Nguyen; Madhu Chetty; Ross L. Coppel; Pramod P. Wangikar (ICDM, 2012)

Data Discretization for Dynamic Bayesian Network Based Modeling of Genetic Networks. - Xuan Vinh Nguyen; Madhu Chetty; Ross L. Coppel; Pramod P. Wangikar (ICONIP (2), 2012)

Gene regulatory network modeling via global optimization of high-order dynamic Bayesian network. - Xuan Vinh Nguyen; Madhu Chetty; Ross L. Coppel; Pramod P. Wangikar (BMC Bioinform., 2012)

A model of the circadian clock in the cyanobacterium Cyanothece sp. ATCC 51142. - Xuan Vinh Nguyen; Madhu Chetty; Ross L. Coppel; Sandeep Gaudana; Pramod P. Wangikar (BMC Bioinform., 2013)

Significance of Non-edge Priors in Gene Regulatory Network Reconstruction. - Ajay Nair; Madhu Chetty; Pramod P. Wangikar (ICONIP (1), 2014)

Frequency Decomposition Based Gene Clustering. - Md. Abdur Rahman 002; Madhu Chetty; Dieter Bulach; Pramod P. Wangikar (ICONIP (2), 2015)

A Computational Approach Using Ratio Statistics for Identifying Housekeeping Genes from cDNA Microarray Data. - T. Sengupta; M. Bhushan; Pramod P. Wangikar (IEEE ACM Trans. Comput. Biol. Bioinform., 2015)