Mach-Zehnder Interferometer Based All Optical Reversible Carry-Lookahead Adder. - Pratik Dutta; Chandan Bandyopadhyay; Chandan Giri; Hafizur Rahaman 001 (ISVLSI, 2014)

All optical implementation of Mach-Zehnder interferometer based reversible sequential circuit. - Pratik Dutta; Chandan Bandyopadhyay; Hafizur Rahaman 001 (VDAT, 2014)

All Optical Implementation of Mach-Zehnder Interferometer Based Reversible Sequential Counters. - Pratik Dutta; Chandan Bandyopadhyay; Hafizur Rahaman 001 (VLSID, 2015)

Fusion of expression values and protein interaction information using multi-objective optimization for improving gene clustering. - Pratik Dutta; Sriparna Saha 001 (Comput. Biol. Medicine, 2017)

Predicting Degree of Relevance of Pathway Markers from Gene Expression Data: A PSO Based Approach. - Pratik Dutta; Sriparna Saha 001; Agni Besh Chauhan (ICONIP (5), 2018)

A Weak Supervision Technique with a Generative Model for Improved Gene Clustering. - Pratik Dutta; Sriparna Saha 001 (CEC, 2019)

Graph-Based Hub Gene Selection Technique Using Protein Interaction Information: Application to Sample Classification. - Pratik Dutta; Sriparna Saha 001; Saurabh Gulati (IEEE J. Biomed. Health Informatics, 2019)

Amalgamation of protein sequence, structure and textual information for improving protein-protein interaction identification. - Pratik Dutta; Sriparna Saha 001 (ACL, 2020)

Incomplete multi-view gene clustering with data regeneration using Shape Boltzmann Machine. - Pratik Dutta; Piyush Mishra; Sriparna Saha 001 (Comput. Biol. Medicine, 2020)

Ensembling of Gene Clusters Utilizing Deep Learning and Protein-Protein Interaction Information. - Pratik Dutta; Sriparna Saha 001; Saraansh Chopra; Varnika Miglani (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

Multimodal Graph-based Transformer Framework for Biomedical Relation Extraction. - Sriram Pingali; Shweta Yadav 001; Pratik Dutta; Sriparna Saha 001 (ACL/IJCNLP (Findings), 2021)

A Multi-Objective Optimization-based Clustering Approach for CORD-19 Scholarly Articles. - Pratik Dutta; Nupur Shah; Sriparna Saha 001 (SMC, 2021)

DB-Corouting: Density Based Coordinated Vehicle Rerouting in Smart Environment. - Pratik Dutta; Sunirmal Khatua; Sankhayan Choudhury (Int. J. Intell. Transp. Syst. Res., 2021)

A multi-objective based PSO approach for inferring pathway activity utilizing protein interactions. - Pratik Dutta; Sriparna Saha 001; Sukanya Naskar (Multim. Tools Appl., 2021)

MultiPredGO: Deep Multi-Modal Protein Function Prediction by Amalgamating Protein Structure, Sequence, and Interaction Information. - Swagarika Jaharlal Giri; Pratik Dutta; Parth Halani; Sriparna Saha 001 (IEEE J. Biomed. Health Informatics, 2021)

DeePROG: Deep Attention-Based Model for Diseased Gene Prognosis by Fusing Multi-Omics Data. - Pratik Dutta; Aditya Prakash Patra; Sriparna Saha 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

DNABERT-2: Efficient Foundation Model and Benchmark For Multi-Species Genome. - Zhihan Zhou 001; Yanrong Ji; Weijian Li 002; Pratik Dutta; Ramana V. Davuluri; Han Liu 001 (CoRR, 2023)

Fast move: A prioritized vehicle rerouting strategy in smart city. - Pratik Dutta; Sunirmal Khatua; Sankhayan Choudhury (Veh. Commun., 2023)

DNABERT-2: Efficient Foundation Model and Benchmark For Multi-Species Genomes. - Zhihan Zhou 001; Yanrong Ji; Weijian Li 002; Pratik Dutta; Ramana V. Davuluri; Han Liu 001 (ICLR, 2024)

Incorporation of gene ontology in identification of protein interactions from biomedical corpus: a multi-modal approach. - Kanchan Jha; Sriparna Saha 001; Pratik Dutta (Ann. Oper. Res., 2024)

A Traffic Management System by Identifying Pollution Hotspots Among Sensitive Points in a Smart City. - Pratik Dutta; Soumyadeep Sur; Sankhayan Choudhury; Sunirmal Khatua (IEEE Access, 2025)

TFBS-Finder: Deep Learning-based Model with DNABERT and Convolutional Networks to Predict Transcription Factor Binding Sites. - Nimisha Ghosh; Pratik Dutta; Daniele Santoni (CoRR, 2025)