Toward an accurate prediction of inter-residue distances in proteins using 2D recursive neural networks. - Predrag Kukic; Claudio Mirabello; Giuseppe Tradigo; Ian Walsh; Pierangelo Veltri; Gianluca Pollastri (BMC Bioinform., 2014)

Mapping the Protein Fold Universe Using the CamTube Force Field in Molecular Dynamics Simulations. - Predrag Kukic; Arvind Kannan; Maurits J. J. Dijkstra; Sanne Abeln; Carlo Camilloni; Michele Vendruscolo (PLoS Comput. Biol., 2015)

Investigation of Ionization Pattern of the Adjacent Acidic Residues in the DXDXE Motif of GH-18 Chitinases Using Theoretical pKa Calculations. - Piyanat Meekrathok; Predrag Kukic; Jens Erik Nielsen; Wipa Suginta (J. Chem. Inf. Model., 2017)