Automatic MRI prostate segmentation using 3D deeply supervised FCN with concatenated atrous convolution. - Bo Wang; Yang Lei 002; Jiwoong Jason Jeong; Tonghe Wang; Yingzi Liu; Sibo Tian; Pretesh Patel; Xiaojun Jiang; Ashesh B. Jani; Hui Mao; Walter J. Curran; Tian Liu 004; et al. (Computer-Aided Diagnosis, 2019)

Automated prostate segmentation of volumetric CT images using 3D deeply supervised dilated FCN. - Bo Wang; Yang Lei 002; Tonghe Wang; Xue Dong; Sibo Tian; Xiaojun Jiang; Ashesh B. Jani; Tian Liu 004; Walter J. Curran; Pretesh Patel; Xiaofeng Yang 005 (Image Processing, 2019)

Towards a Robotically Steerable System for High Dose Rate Brachytherapy. - Nancy Joanna Deaton; Yash Chitalia; Pretesh Patel; Jaydev P. Desai (ISER, 2020)

Intensity non-uniformity correction in MR imaging using deep learning. - Xianjin Dai; Yang Lei 002; Yingzi Liu; Tonghe Wang; Walter J. Curran; Pretesh Patel; Tian Liu 004; Xiaofeng Yang 005 (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2020)

Multi-organ segmentation in pelvic CT images with CT-based synthetic MRI. - Yang Lei 002; Xue Dong; Sibo Tian; Tonghe Wang; Pretesh Patel; Walter J. Curran; Ashesh B. Jani; Tian Liu 004; Xiaofeng Yang 005 (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2020)

Multiparametric MRI-guided high-dose-rate prostate brachytherapy with focal dose boost to dominant intraprostatic lesions. - Tonghe Wang; Matt Giles; Robert H. Press; Xianjin Dai; Ashesh B. Jani; Peter Rossi; Yang Lei 002; Walter J. Curran; Pretesh Patel; Tian Liu 004; Xiaofeng Yang 005 (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2020)

Cone-beam Computed Tomography (CBCT) and CT image registration aided by CBCT-based synthetic CT. - Yabo Fu; Yang Lei 002; Yingzi Liu; Tonghe Wang; Walter J. Curran; Tian Liu 004; Pretesh Patel; Xiaofeng Yang 005 (Image Processing, 2020)

Non-rigid MRI-CT image registration with unsupervised deepdlearning-based deformation prediction. - Yabo Fu; Yang Lei 002; Jun Zhou 025; Tonghe Wang; Ashesh B. Jani; Pretesh Patel; Hui Mao; Walter J. Curran; Tian Liu 004; Xiaofeng Yang 005 (Image Processing, 2020)

Synthetic MRI-aided pelvic multi-organ segmentation in cone-beam computed tomography. - Yang Lei 002; Sibo Tian; Yabo Fu; Xue Dong; Tonghe Wang; Ashesh B. Jani; David M. Schuster; Walter J. Curran; Pretesh Patel; Tian Liu 004; Xiaofeng Yang 005 (Image Processing, 2020)

Liver synthetic CT generation based on a dense-CycleGAN for MRI-only treatment planning. - Yingzi Liu; Yang Lei 002; Tonghe Wang; Jun Zhou 025; Liyong Lin; Tian Liu 004; Pretesh Patel; Walter J. Curran; Lei Ren; Xiaofeng Yang 005 (Image Processing, 2020)

Weakly non-rigid MR-TRUS prostate registration using fully convolutional and recurrent neural networks. - Qiulan Zeng; Yabo Fu; Jiwoong Jason Jeong; Yang Lei 002; Tonghe Wang; Hui Mao; Ashesh B. Jani; Pretesh Patel; Walter J. Curran; Tian Liu 004; Xiaofeng Yang 005 (Image Processing, 2020)

Multi-Needle Detection in 3D Ultrasound Images Using Unsupervised Order-Graph Regularized Sparse Dictionary Learning. - Yupei Zhang; Xiuxiu He; Zhen Tian; Jiwoong Jason Jeong; Yang Lei 002; Tonghe Wang; Qiulan Zeng; Ashesh B. Jani; Walter J. Curran; Pretesh Patel; Tian Liu 004; Xiaofeng Yang 005 (IEEE Trans. Medical Imaging, 2020)

A learning-based nonrigid MRI-CBCT image registration method for MRI-guided prostate cancer radiotherapy. - Yabo Fu; Yang Lei 002; Tonghe Wang; Pretesh Patel; Ashesh B. Jani; Hui Mao; Walter J. Curran; Tian Liu 004; Xiaofeng Yang 005 (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2021)

Deformable MRI-CT liver image registration using convolutional neural network with modality independent neighborhood descriptors. - Yabo Fu; Yang Lei 002; Tonghe Wang; Jun Zhou 025; Walter J. Curran; Pretesh Patel; Tian Liu 004; Xiaofeng Yang 005 (Computer-Aided Diagnosis, 2021)

Deep learning-based deformable MRI-CBCT registration of male pelvic region. - Shadab Momin; Yang Lei 002; Tonghe Wang; Yabo Fu; Pretesh Patel; Ashesh B. Jani; Walter J. Curran; Tian Liu 004; Xiaofeng Yang 005 (Computer-Aided Diagnosis, 2021)

Multi-organ segmentation of male pelvic CT using dual attention networks. - Yang Lei 002; Tonghe Wang; Sibo Tian; Yabo Fu; Pretesh Patel; Ashesh B. Jani; Walter J. Curran; Tian Liu 004; Xiaofeng Yang 005 (Image-Guided Procedures, 2021)

Region proposal network for multi-organ segmentation in CT for pancreatic radiotherapy. - Xianjin Dai; Yang Lei 002; James Janopaul-Naylor; Tonghe Wang; Justin Roper; Tian Liu 004; Walter J. Curran; Pretesh Patel; Xiaofeng Yang 005 (Image-Guided Procedures, 2021)

Deep learning-based multi-catheter reconstruction for MRI-guided HDR prostate brachytherapy. - Xianjin Dai; Yang Lei 002; Yupei Zhang; Tonghe Wang; Walter J. Curran; Pretesh Patel; Tian Liu 004; Xiaofeng Yang 005 (Image-Guided Procedures, 2021)

Abdominal CT-CBCT deformable image registration using Deep Neural Network with directional local structural similarity. - Yabo Fu; Yang Lei 002; Tonghe Wang; Jun Zhou 025; Pretesh Patel; Walter J. Curran; Tian Liu 004; Xiaofeng Yang 005 (Image-Guided Procedures, 2021)

CT-MRI pelvic deformable registration via deep learning. - Shadab Momin; Yang Lei 002; Tonghe Wang; Yabo Fu; Pretesh Patel; Ashesh B. Jani; Walter J. Curran; Tian Liu 004; Xiaofeng Yang 005 (Image-Guided Procedures, 2021)

Radiation dose prediction for pancreatic stereotactic body radiotherapy via convention neural networks. - Shadab Momin; Yang Lei 002; Tonghe Wang; Yabo Fu; Pretesh Patel; Ashesh B. Jani; Walter J. Curran; Tian Liu 004; Xiaofeng Yang 005 (Image-Guided Procedures, 2021)

Ultrasound multi-needle detection using deep attention U-Net with TV regularizations. - Yupei Zhang; Yang Lei 002; Xiuxiu He; Zhen Tian; Jiwoong Jason Jeong; Tonghe Wang; Qiulan Zeng; Ashesh B. Jani; Walter J. Curran; Pretesh Patel; Tian Liu 004; Xiaofeng Yang 005 (Image-Guided Procedures, 2021)

Prostate dose prediction in HDR Brachytherapy using unsupervised multi-atlas fusion. - Yang Lei 002; Yabo Fu; Tonghe Wang; Walter J. Curran; Tian Liu 004; Pretesh Patel; Xiaofeng Yang 005 (Image Processing, 2021)

Synthetic CT-based multi-organ segmentation in cone beam CT for adaptive pancreatic radiotherapy. - Xianjin Dai; Yang Lei 002; James Janopaul-Naylor; Tonghe Wang; Justin Roper; Jun Zhou 025; Walter J. Curran; Tian Liu 004; Pretesh Patel; Xiaofeng Yang 005 (Image Processing, 2021)

Daily cone-beam CT multi-organ segmentation for prostate adaptive radiotherapy. - Yabo Fu; Yang Lei 002; Tonghe Wang; Sibo Tian; Pretesh Patel; Ashesh B. Jani; Walter J. Curran; Tian Liu 004; Xiaofeng Yang 005 (Image Processing, 2021)

Deep learning-based deformable image registration of inter-fraction CBCT images for adaptive radiation therapy. - Huiqiao Xie; Yang Lei 002; Tonghe Wang; Yabo Fu; Xiangyang Tang; Walter J. Curran; Pretesh Patel; Tian Liu 004; Xiaofeng Yang 005 (Image Processing, 2021)

Biomechanically constrained non-rigid MR-TRUS prostate registration using deep learning based 3D point cloud matching. - Yabo Fu; Yang Lei 002; Tonghe Wang; Pretesh Patel; Ashesh B. Jani; Hui Mao; Walter J. Curran; Tian Liu 004; Xiaofeng Yang 005 (Medical Image Anal., 2021)

Male pelvic multi-organ segmentation using V-transformer network. - Shaoyan Pan; Yang Lei 002; Tonghe Wang; Jacob F. Wynne; Justin Roper; Ashesh B. Jani; Pretesh Patel; Jeffrey D. Bradley; Tian Liu 004; Xiaofeng Yang 005 (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2022)

Neurovascular bundles segmentation on MRI via hierarchical object activation network. - Yang Lei 002; Tonghe Wang; Justin Roper; Sibo Tian; Pretesh Patel; Jeffrey D. Bradley; Ashesh B. Jani; Tian Liu 004; Xiaofeng Yang 005 (Computer-Aided Diagnosis, 2022)

Deep-learning-based modulated radiotherapy dose plan prediction with integration of non-modulated dose distribution. - Shadab Momin; Yang Lei 002; Jiahan Zhang; Tonghe Wang; Justin Roper; Jeffrey D. Bradley; Pretesh Patel; Tian Liu 004; Xiaofeng Yang 005 (Image-Guided Procedures, 2022)

Deformable Image Registration using Unsupervised Deep Learning for CBCT-guided Abdominal Radiotherapy. - Huiqiao Xie; Yang Lei 002; Yabo Fu; Tonghe Wang; Justin Roper; Jeffrey D. Bradley; Pretesh Patel; Tian Liu 004; Xiaofeng Yang 005 (CoRR, 2022)

Landmark Tracking in Liver US images Using Cascade Convolutional Neural Networks with Long Short-Term Memory. - Yupei Zhang; Xianjin Dai; Zhen Tian; Yang Lei 002; Jacob F. Wynne; Pretesh Patel; Yue Chen; Tian Liu 004; Xiaofeng Yang 005 (CoRR, 2022)

Prostate Gleason score prediction via MRI using capsule network. - Yuheng Li; Jing Wang 118; Mingzhe Hu; Pretesh Patel; Hui Mao; Tian Liu 004; Xiaofeng Yang 005 (Computer-Aided Diagnosis, 2023)

Multi-organ CT segmentation using shifted-window multilayer perceptron mixer. - Shaoyan Pan; Jacob F. Wynne; Mingzhe Hu; Tonghe Wang; Justin Roper; Pretesh Patel; Tian Liu 004; Xiaofeng Yang 005 (Image-Guided Procedures, 2023)

Cross-Shaped Windows Transformer with Self-supervised Pretraining for Clinically Significant Prostate Cancer Detection in Bi-parametric MRI. - Yuheng Li; Jacob F. Wynne; Jing Wang 118; Richard L. J. Qiu; Justin Roper; Shaoyan Pan; Ashesh B. Jani; Tian Liu 004; Pretesh R. Patel; Hui Mao; Xiaofeng Yang 005 (CoRR, 2023)

Synthetic CT Generation from MRI using 3D Transformer-based Denoising Diffusion Model. - Shaoyan Pan; Elham Abouei; Jacob F. Wynne; Tonghe Wang; Richard L. J. Qiu; Yuheng Li; Chih-Wei Chang; Junbo Peng; Justin Roper; Pretesh Patel; David S. Yu; Hui Mao; et al. (CoRR, 2023)

Diffeomorphic Transformer-based Abdomen MRI-CT Deformable Image Registration. - Yang Lei 002; Luke A. Matkovic; Justin Roper; Tonghe Wang; Jun Zhou 025; Beth B. Ghavidel; Mark McDonald; Pretesh Patel; Xiaofeng Yang 005 (CoRR, 2024)