Sensitivity Analysis of Genome-Scale Metabolic Flux Prediction. - Puhua Niu; Maria J. Soto; Shuai Huang 001; Byung-Jun Yoon; Edward R. Dougherty; Francis J. Alexander; Ian Blaby; Xiaoning Qian (J. Comput. Biol., 2023)

Calibration of Compartmental Epidemiological Models via Graybox Bayesian Optimization. - Puhua Niu; Byung-Jun Yoon; Xiaoning Qian (BHI, 2024)

GFlowNet Training by Policy Gradients. - Puhua Niu; Shili Wu; Mingzhou Fan; Xiaoning Qian (ICML, 2024)

Epidemiological Model Calibration via Graybox Bayesian Optimization. - Puhua Niu; Byung-Jun Yoon; Xiaoning Qian (CoRR, 2024)

Robust Behavior Cloning Via Global Lipschitz Regularization. - Shili Wu; Yizhao Jin; Puhua Niu; Aniruddha Datta; Sean B. Andersson (CoRR, 2025)