Dynamic Simulations on the Arachidonic Acid Metabolic Network. - Kun Yang 003; Wenzhe Ma; Huanhuan Liang; Qi Ouyang; Chao Tang; Luhua Lai (PLoS Comput. Biol., 2007)

Interactive analysis of systems biology molecular expression data. - Mingwu Zhang; Qi Ouyang; Alan Stephenson; Michael D. Kane; David E. Salt; Sunil Prabhakar 001; John Burgner; Charles R. Buck; Xiang Zhang (BMC Syst. Biol., 2008)

Identification of a Topological Characteristic Responsible for the Biological Robustness of Regulatory Networks. - Yangle Wu; Xiaomeng Zhang; Jianglei Yu; Qi Ouyang (PLoS Comput. Biol., 2009)

Quantitative Modeling of Escherichia coli Chemotactic Motion in Environments Varying in Space and Time. - Lili Jiang; Qi Ouyang; Yuhai Tu (PLoS Comput. Biol., 2010)

Rational design of a biosensor circuit with semi-log dose-response function in Escherichia coli. - Haoqian Zhang; Ying Sheng 008; Qianzhu Wu; Ao Liu; Yuheng Lu; Zhenzhen Yin; Yuansheng Cao; Weiqian Zeng; Qi Ouyang (Quant. Biol., 2013)

Correlation between Oncogenic Mutations and Parameter Sensitivity of the Apoptosis Pathway Model. - Jia Chen; Haicen Yue; Qi Ouyang (PLoS Comput. Biol., 2014)

Theoretical modelings for mobile web service QoE assessment. - Meng Zhang 003; Zhongyi Shen; Xin Zhang 001; Longyuan Luan; Qi Ouyang (WCNC, 2015)

Unsupervised single-particle deep classification via statistical manifold learning. - Jiayi Wu; Yongbei Ma; Charles Condgon; Bevin Brett; Shuobing Chen; Qi Ouyang; Youdong Mao (CoRR, 2016)

A deep learning approach to single-particle recognition in cryo-electron microscopy. - Yanan Zhu; Qi Ouyang; Youdong Mao (CoRR, 2016)

Generalization of interpolation DFT algorithms and frequency estimators with high image component interference rejection. - Jiufei Luo; Shuaicheng Hou; Xinyi Li; Qi Ouyang; Yi Zhang 053 (EURASIP J. Adv. Signal Process., 2016)

A deep convolutional neural network approach to single-particle recognition in cryo-electron microscopy. - Yanan Zhu; Qi Ouyang; Youdong Mao (BMC Bioinform., 2017)

Reconstructing the regulatory circuit of cell fate determination in yeast mating response. - Bin Shao; Haiyu Yuan; Rongfei Zhang; Xuan Wang; Shuwen Zhang; Qi Ouyang; Nan Hao; Chunxiong Luo (PLoS Comput. Biol., 2017)

Exploring the inhibitory effect of membrane tension on cell polarization. - Weikang Wang; Kuan Tao; Jing Wang; Gen Yang; Qi Ouyang; Yugang Wang; Lei Zhang; Feng Liu 049 (PLoS Comput. Biol., 2017)

An Improved Design of the Spiral-Coil EMAT for Enhancing the Signal Amplitude. - Xiaojuan Jia; Qi Ouyang; Xinglan Zhang (Sensors, 2017)

Genome-scale fluxes predicted under the guidance of enzyme abundance using a novel hyper-cube shrink algorithm. - Zhengwei Xie; Tianyu Zhang; Qi Ouyang (Bioinform., 2018)

Constructing network topologies for multiple signal-encoding functions. - Lili Wu; Hongli Wang; Qi Ouyang (BMC Syst. Biol., 2019)

2D Rotation-Angle Measurement Utilizing Least Iterative Region Segmentation. - Chenguang Cao; Qi Ouyang (Sensors, 2019)

Visual Locating of Reactor in an Industrial Environment Using the Composite Method. - Chenguang Cao; Qi Ouyang; Jiamu Hou; Liming Zhao (Sensors, 2020)

Nonequilibrium Thermodynamics in Biochemical Systems and Its Application. - Dongliang Zhang; Qi Ouyang (Entropy, 2021)

Preview Control with Dynamic Constraints for Autonomous Vehicles. - Rui Li; Qi Ouyang; Yue Cui; Yang Jin (Sensors, 2021)

Long Short-Term Memory and Graph Convolution Network for Forecasting the Crude Oil Traffic Flow. - Qi Ouyang; Tengda Sun; Yuanyuan Xue; Zhehui Liu (IEEE Access, 2022)

Investigating the Influence of Design Frequency on the Ultrasonic Signal of PFSV-EMATs. - Xiaojuan Jia; Min Liu; Jingjun Zhang; Qi Ouyang (J. Sensors, 2022)

Incomplete Mixed Data Outlier Detection based on Local Difference Information. - Ran Li; Shuxin Liu; Hongchang Chen; Kai Wang 066; Junjie Zhang; Shibo Zhang; Qi Ouyang (ICCIP, 2023)

A multi-population quantum genetic algorithm for improving the robustness of interdependent networks. - Junjie Zhang; Shuxin Liu; Caixia Liu; Weifei Zang; Shibo Zhang; Ran Li; Qi Ouyang (ICCIP, 2023)

Dynamical modelling of viral infection and cooperative immune protection in COVID-19 patients. - Zhengqing Zhou; Dianjie Li; Ziheng Zhao; Shuyu Shi; Jianghua Wu; Jianwei Li; Jingpeng Zhang; Ke Gui; Yu Zhang; Qi Ouyang; Heng Mei; Yu Hu; et al. (PLoS Comput. Biol., 2023)

Functional predictability of universal gene circuits in diverse microbial hosts. - Chenrui Qin; Tong Xu; Xuejin Zhao; Yeqing Zong; Haoqian M. Zhang; Chunbo Lou; Qi Ouyang; Long Qian (Quant. Biol., 2024)

Characterizing multidimensional cellular physiological states with quantitative 3D shape descriptors for cell membranes. - Guoye Guan; Yixuan Chen; Hongli Wang; Qi Ouyang; Chao Tang (Zenodo, 2024)

Characterizing multidimensional cellular physiological states with quantitative 3D shape descriptors for cell membranes. - Guoye Guan; Yixuan Chen; Hongli Wang; Qi Ouyang; Chao Tang (Zenodo, 2024)

Characterizing multidimensional cellular physiological states with quantitative three-dimensional shape descriptors for cell membranes. - Guoye Guan; Yixuan Chen; Hongli Wang; Qi Ouyang; Chao Tang (Zenodo, 2024)

Protocol for simulating the effect of THz electromagnetic field on ion channels. - Lingfeng Xue; Zigang Song; Qi Ouyang; Chen Song (Quant. Biol., 2025)