Subject level clustering using a negative binomial model for small transcriptomic studies. - Qian Li 023; Janelle R. Noel-MacDonnell; Devin C. Koestler; Ellen L. Goode; Brooke L. Fridley (BMC Bioinform., 2018)

GMSimpute: a generalized two-step Lasso approach to impute missing values in label-free mass spectrum analysis. - Qian Li 023; Kate Fisher; Wenjun Meng; Bin Fang; Eric A. Welsh; Eric B. Haura; John M. Koomen; Steven A. Eschrich; Brooke L. Fridley; Yian Ann Chen (Bioinform., 2020)

Incomplete time-series gene expression in integrative study for islet autoimmunity prediction. - Khandakar Tanvir Ahmed; Sze Cheng; Qian Li 023; Jeongsik Yong; Wei Zhang 076 (Briefings Bioinform., 2023)

Integrating spatial transcriptomics and bulk RNA-seq: predicting gene expression with enhanced resolution through graph attention networks. - Sudipto Baul; Khandakar Tanvir Ahmed; Qibing Jiang; Guangyu Wang; Qian Li 023; Jeongsik Yong; Wei Zhang 076 (Briefings Bioinform., 2024)