Accurate assembly of multi-end RNA-seq data with Scallop2. - Qimin Zhang; Qian Shi 006; Mingfu Shao (Nat. Comput. Sci., 2022)

Seeding with minimized subsequence. - Xiang Li; Qian Shi 006; Ke Chen 011; Mingfu Shao (Bioinform., 2023)

Accurate Assembly of Circular RNAs with TERRACE. - Tasfia Zahin; Qian Shi 006; Xiaofei Carl Zang; Mingfu Shao (RECOMB, 2024)

Accurate assembly of multiple RNA-seq samples with Aletsch. - Qian Shi 006; Qimin Zhang; Mingfu Shao (Bioinform., 2024)

Learning locality-sensitive bucketing functions. - Xin Yuan; Ke Chen 011; Xiang Li; Qian Shi 006; Mingfu Shao (Bioinform., 2024)