Site of metabolism prediction for six biotransformations mediated by cytochromes P450. - Mingyue Zheng; Xiaomin Luo; Qiancheng Shen; Yong Wang; Yun Du; Weiliang Zhu; Hualiang Jiang (Bioinform., 2009)

Fragment-based prediction of skin sensitization using recursive partitioning. - Jing Lu; Mingyue Zheng; Yong Wang; Qiancheng Shen; Xiaomin Luo; Hualiang Jiang; Kaixian Chen (J. Comput. Aided Mol. Des., 2011)

Knowledge-Based Scoring Functions in Drug Design: 2. Can the Knowledge Base Be Enriched? - Qiancheng Shen; Bing Xiong 003; Mingyue Zheng; Xiaomin Luo; Cheng Luo; Xian Liu; Yun Du; Jing Li; Weiliang Zhu; Jingkang Shen; Hualiang Jiang (J. Chem. Inf. Model., 2011)

Knowledge-Based Scoring Functions in Drug Design: 3. A Two-Dimensional Knowledge-Based Hydrogen-Bonding Potential for the Prediction of Protein-Ligand Interactions. - Mingyue Zheng; Bing Xiong 003; Cheng Luo; Shanshan Li; Xian Liu; Qiancheng Shen; Jing Li; Weiliang Zhu; Xiaomin Luo; Hualiang Jiang (J. Chem. Inf. Model., 2011)

Estimation of Carcinogenicity Using Molecular Fragments Tree. - Yong Wang; Jing Lu; Fei Wang 012; Qiancheng Shen; Mingyue Zheng; Xiaomin Luo; Weiliang Zhu; Hualiang Jiang; Kaixian Chen (J. Chem. Inf. Model., 2012)

In silico site of metabolism prediction for human UGT-catalyzed reactions. - Jianlong Peng; Jing Lu; Qiancheng Shen; Mingyue Zheng; Xiaomin Luo; Weiliang Zhu; Hualiang Jiang; Kaixian Chen (Bioinform., 2014)

Estimation of acute oral toxicity in rat using local lazy learning. - Jing Lu; Jianlong Peng; Jinan Wang; Qiancheng Shen; Yi Bi; Likun Gong; Mingyue Zheng; Xiaomin Luo; Weiliang Zhu; Hualiang Jiang; Kaixian Chen (J. Cheminformatics, 2014)

ASD v2.0: updated content and novel features focusing on allosteric regulation. - Zhimin Huang; Linkai Mou; Qiancheng Shen; Shaoyong Lu; Chuangang Li; Xinyi Liu 003; Guanqiao Wang; Shuai Li; Lv Geng; Yaqin Liu; Jiawei Wu; Guoqiang Chen; et al. (Nucleic Acids Res., 2014)

The Structural Basis of ATP as an Allosteric Modulator. - Shaoyong Lu; Wenkang Huang; Qi Wang; Qiancheng Shen; Shuai Li; Ruth Nussinov; Jian Zhang 037 (PLoS Comput. Biol., 2014)

ASBench: benchmarking sets for allosteric discovery. - Wenkang Huang; Guanqiao Wang; Qiancheng Shen; Xinyi Liu 003; Shaoyong Lu; Lv Geng; Zhimin Huang; Jian Zhang 037 (Bioinform., 2015)

Alloscore: a method for predicting allosteric ligand-protein interactions. - Shuai Li; Qiancheng Shen; Minyi Su; Xinyi Liu 003; Shaoyong Lu; Zhongjie Chen; Renxiao Wang; Jian Zhang 037 (Bioinform., 2016)

ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks. - Qiancheng Shen; Guanqiao Wang; Shuai Li; Xinyi Liu 003; Shaoyong Lu; Zhongjie Chen; Kun Song 003; Junhao Yan; Lv Geng; Zhimin Huang; Wenkang Huang; Guoqiang Chen; et al. (Nucleic Acids Res., 2016)

Improved Method for the Identification and Validation of Allosteric Sites. - Kun Song 003; Xinyi Liu 003; Wenkang Huang; Shaoyong Lu; Qiancheng Shen; Lu Zhang; Jian Zhang 037 (J. Chem. Inf. Model., 2017)

AlloFinder: a strategy for allosteric modulator discovery and allosterome analyses. - Min Huang; Kun Song 003; Xinyi Liu 003; Shaoyong Lu; Qiancheng Shen; Renxiao Wang; Jingze Gao; Yuanyuan Hong; Qian Li; Duan Ni; Jianrong Xu; Guoqiang Chen; et al. (Nucleic Acids Res., 2018)

Are the Apo Proteins Suitable for the Rational Discovery of Allosteric Drugs? - Xiaoli An; Shaoyong Lu; Kun Song 003; Qiancheng Shen; Meilan Huang; Xiaojun Yao; Huanxiang Liu; Jian Zhang 037 (J. Chem. Inf. Model., 2019)

AlloDriver: a method for the identification and analysis of cancer driver targets. - Kun Song 003; Qian Li; Wei Gao; Shaoyong Lu; Qiancheng Shen; Xinyi Liu 003; Yongyan Wu; Binquan Wang; Houwen Lin; Guoqiang Chen; Jian Zhang 037 (Nucleic Acids Res., 2019)

Unraveling allosteric landscapes of allosterome with ASD. - Xinyi Liu 003; Shaoyong Lu; Kun Song 003; Qiancheng Shen; Duan Ni; Qian Li; Xinheng He; Hao Zhang; Qi Wang; Yingyi Chen; Xinyi Li; Jing Wu; et al. (Nucleic Acids Res., 2020)